DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrR and Adra2b

DIOPT Version :9

Sequence 1:NP_001287381.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_033763.3 Gene:Adra2b / 11552 MGIID:87935 Length:448 Species:Mus musculus


Alignment Length:532 Identity:157/532 - (29%)
Similarity:226/532 - (42%) Gaps:119/532 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SWQGIILIAVFATFIVV-TVIGNTLVILAILTTRRLRTITNCFVMSLAVADLLVGIFVMPPAVAV 176
            |.|....||...||::: |:.||.|||||:||:|.||...|.|::|||.||:||...::|.::|.
Mouse     8 SVQATAAIASAITFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLAN 72

  Fly   177 HLIGSWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIV 241
            .|:|.|......|:::::||||.||:||:.|||||:|||.||:|.|.|:.||..:|:..| ||.|
Mouse    73 ELLGYWYFWRAWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKCI-ILTV 136

  Fly   242 WLLALAITCPPML--GWYEPGRRDLRECRYNQNEGYVIFSAMGSFFIPMAVMIYVYARISCVIAS 304
            ||:|..|:.||::  |...|....|.:|..||...|::.|::||||.|..:||.||.|| .|||.
Mouse   137 WLIAAVISLPPLIYKGDQRPEPHGLPQCELNQEAWYILASSIGSFFAPCLIMILVYLRI-YVIAK 200

  Fly   305 RHDNMTDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQATSRTFSNQTIAKELQDMMLSDS 369
            |                                                                
Mouse   201 R---------------------------------------------------------------- 201

  Fly   370 DNCAAMGAGGAGGGGGGASS----ATGGTHCQS---LLALPSGGVGGSMGCAKNGCYELTRPSSL 427
            .:|..:||  ..|.|.|.|.    |.||....:   .|..|...||.:.|          .|...
Mouse   202 SHCRGLGA--KRGSGEGESKKPHPAAGGVPASAKVPTLVSPLSSVGEANG----------HPKPP 254

  Fly   428 KRASTASTTITTMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLSQPPRTHSFRHSHGERDRERL 492
            :......|........:.|..|.|....|.|..|.:|              :......|.|.|.:
Mouse   255 REKEEGETPEDPEARALPPNWSALPRSVQDQKKGTSG--------------ATAEKGAEEDEEEV 305

  Fly   493 R------------SHHHHPHYHHQAGVTTTSTSGNTSANTN----SKSLSNRITSLKKENKTTQT 541
            .            |..:.|....|......:..|....:.|    |.....|.|.|.:|.:.|..
Mouse   306 EECEPQTLPASPASVFNPPLQQPQTSRVLATLRGQVLLSKNVGVASGQWWRRRTQLSREKRFTFV 370

  Fly   542 LSIVVGGFIACWLPFFINYLITPFLAEH-QASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAF 605
            |::|:|.|:.||.|||.:|.:.....:| :....|.:...|:|:.||::||.||..::.|||.||
Mouse   371 LAVVIGVFVVCWFPFFFSYSLGAICPQHCKVPHGLFQFFFWIGYCNSSLNPVIYTIFNQDFRRAF 435

  Fly   606 WRLTCKRFFSAG 617
            .|:.|:::...|
Mouse   436 RRILCRQWTQTG 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_001287381.1 7tm_4 127..>249 CDD:304433 59/122 (48%)
7tm_1 133..>298 CDD:278431 78/166 (47%)
Adra2bNP_033763.3 7tmA_alpha2B_AR 7..435 CDD:320444 152/518 (29%)
TM helix 1 14..40 CDD:320444 13/25 (52%)
TM helix 2 47..73 CDD:320444 11/25 (44%)
TM helix 3 85..115 CDD:320444 18/29 (62%)
TM helix 4 127..150 CDD:320444 11/23 (48%)
TM helix 5 169..198 CDD:320444 13/29 (45%)
PRK12323 <209..354 CDD:237057 31/170 (18%)
TM helix 6 362..392 CDD:320444 12/29 (41%)
TM helix 7 403..428 CDD:320444 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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