DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and htr4

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:XP_009289337.1 Gene:htr4 / 101882850 ZFINID:ZDB-GENE-160114-31 Length:423 Species:Danio rerio


Alignment Length:514 Identity:124/514 - (24%)
Similarity:183/514 - (35%) Gaps:220/514 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 IILIAVFATFIVVTVIGNTLVILAILTTRRLRTI-TNCFVMSLAVADLLVGIFVMPPAVAVHLI- 179
            :.||:..:..::::|:||.||::|:...|:||.| ||.|::|||.|||||.:.|||.. |:.|| 
Zfish    60 VALISFLSLVMLMSVLGNLLVMVAVCKDRQLRKIKTNYFIVSLAFADLLVSVLVMPFG-AIELIH 123

  Fly   180 GSWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAV-TRPLTYSRKRRSKRLALIMILIVWL 243
            .:|..|...|.:..||||||.|||||.||.||:|||.|: .:||.|..|....|:.| ||...|:
Zfish   124 QNWIYGETFCLVRTSLDVLLTTASILHLCCISLDRYYAICCQPLVYRNKMTPLRVTL-MIGGCWI 187

  Fly   244 LALAIT-CPPMLGWYEPGRRDLRE----------CRYNQNEGYVIFSAMGSFFIPMAVMIYVYAR 297
            :...|: .|.|.||...|.:||.:          |.:..|:.|.:..::.:|::|:.:|:..|.|
Zfish   188 IPTVISFLPIMQGWNSIGIKDLIDKRKISGNSTVCVFMVNKPYALTCSVVAFYLPLVLMVLAYQR 252

  Fly   298 ISCVIASRHDNMTDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQATSRTFSNQTIAKELQ 362
            |                       |..|        :|....:...||                 
Zfish   253 I-----------------------YVTA--------REHARQISMLQR----------------- 269

  Fly   363 DMMLSDSDNCAAMGAGGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGCYELTRPSSL 427
                              .||.|.|.||                                     
Zfish   270 ------------------AGGAGNADSA------------------------------------- 279

  Fly   428 KRASTASTTITTMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLSQPPRTHSFRHSHGERDRERL 492
                                                                          :..
Zfish   280 --------------------------------------------------------------DHQ 282

  Fly   493 RSHHHHPHYHHQAGVTTTSTSGNTSANTNSKSLSNRITSLKKENKTTQTLSIVVGGFIACWLPFF 557
            |:|.                                   ::.|.|..:||.|::|.|..||.|||
Zfish   283 RNHR-----------------------------------MRTETKAAKTLCIIMGCFCLCWAPFF 312

  Fly   558 INYLITPFLAEHQASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRLTC---KRF 613
            |..::.||: ::...:.|..|..|||:.||.:||.:|||.:..||.||..:.|   ||:
Zfish   313 ITNVVDPFI-DYSVPEQLWAACLWLGYINSMLNPILYAFLNKSFRRAFLIILCCGHKRY 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 77/199 (39%)
TM helix 1 118..144 CDD:320189 8/25 (32%)
TM helix 2 151..177 CDD:320189 15/25 (60%)
TM helix 3 189..219 CDD:320189 20/30 (67%)
TM helix 4 232..255 CDD:320189 8/23 (35%)
TM helix 5 272..297 CDD:320189 6/24 (25%)
7tm_GPCRs <533..605 CDD:475119 29/71 (41%)
TM helix 6 539..561 CDD:320189 11/21 (52%)
TM helix 7 573..598 CDD:320189 12/24 (50%)
htr4XP_009289337.1 7tmA_5-HT4 60..359 CDD:320184 119/501 (24%)
TM helix 1 61..87 CDD:320184 8/25 (32%)
TM helix 2 95..121 CDD:320184 15/26 (58%)
TM helix 3 133..163 CDD:320184 20/29 (69%)
TM helix 4 176..199 CDD:320184 7/23 (30%)
TM helix 5 227..256 CDD:320184 9/51 (18%)
TM helix 6 288..318 CDD:320184 13/29 (45%)
TM helix 7 327..352 CDD:320184 12/24 (50%)

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