DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and chrm1

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:XP_004913717.1 Gene:chrm1 / 100490434 XenbaseID:XB-GENE-22061118 Length:521 Species:Xenopus tropicalis


Alignment Length:557 Identity:145/557 - (26%)
Similarity:234/557 - (42%) Gaps:139/557 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 WQGIILIAVFATFIVVTVIGNTLVILAILTTRRLRTITNCFVMSLAVADLLVGIFVMPPAVAVHL 178
            |:.::::.......:||||||.||:||......|:|:.|.|::|||.||:::|...|.......:
 Frog    45 WEVVLIVITTGILSLVTVIGNVLVLLAFKVNSDLKTVNNYFLLSLACADIIIGALSMNLYTTYIV 109

  Fly   179 IGSWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIVWL 243
            :|.|.||.|.||:|::||.:...||:::|..||.|||.::|||||| |.:|:.|.|.|||.:.|.
 Frog   110 MGRWALGPVSCDLWLALDYVASNASVMNLLIISFDRYFSITRPLTY-RAKRTPRRAAIMIGMAWF 173

  Fly   244 LALAITCPPMLGW-YEPGRR--DLRECRYNQ--NEGYVIF-SAMGSFFIPMAVMIYVYARISCVI 302
            ::..:..|.::.| |..|.|  :..:| |.|  ::..:.| :|:.:|::|:.:||.:|.|:    
 Frog   174 ISFVLWAPAIIFWQYIVGERTVEATDC-YIQFFSQPIITFGTAIAAFYLPVTIMIILYWRV---- 233

  Fly   303 ASRHDNMTDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQATSRTFSNQTIAKELQDMMLS 367
                                                     .|:..:|       :|||..:..|
 Frog   234 -----------------------------------------YRETENR-------SKELAGLQGS 250

  Fly   368 DSDNCA---AMGA--GGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGC---YELTRP 424
            .:|:.:   |:|:  .|:..|.|.:...:.|..     .:|.         ||.||   .:||..
 Frog   251 GTDHTSHPLALGSVRSGSSSGAGESERLSRGQR-----TVPR---------AKQGCCFPRQLTSN 301

  Fly   425 SSLK-----RASTASTTITTMTS--GMGPGSSLLDAQWQSQ------------------PPGQTG 464
            .||:     |::.:..|:....|  .:...|...|..::.:                  |.|..|
 Frog   302 PSLRSYPEHRSNGSCNTMEDAASADSLSSSSEAEDRPYEMKNICSAVIRLPMVSSVVGTPKGSRG 366

  Fly   465 QVQTHSLSQPPRTHSFRHSHGERDRERLRSHHHHPHYHHQAGVT---TTSTSGNTSANTNSKSLS 526
            ...|             ...|:.:.|.............:|.||   :|.....:..|.:.|..|
 Frog   367 SSDT-------------LGRGDIEAETNGGKSEVTRKTSRAQVTALPSTIIRAKSEKNHHGKRKS 418

  Fly   527 NRITSLKKENKTTQTLSIVVGGFIACWLPFFINYLITPFLAEHQASQMLAKAL----TWLGWFNS 587
            |   ||.||.|..:|||.::..||..|.|:.|..|::.|..:     .:.|.|    .||.:.||
 Frog   419 N---SLIKEKKAAKTLSAILLAFILTWTPYNIMVLVSTFCPD-----CVPKKLWELGYWLCYVNS 475

  Fly   588 AINPFIYAFYSVDFRAAF-WRLTC---KRFFSAGQKP 620
            .:||..||..:..||..| ..|.|   ||.:.|.:.|
 Frog   476 TVNPMCYALCNRSFRRTFKMLLLCRWDKRKWRAHKHP 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 69/191 (36%)
TM helix 1 118..144 CDD:320189 10/25 (40%)
TM helix 2 151..177 CDD:320189 9/25 (36%)
TM helix 3 189..219 CDD:320189 13/29 (45%)
TM helix 4 232..255 CDD:320189 7/22 (32%)
TM helix 5 272..297 CDD:320189 7/25 (28%)
7tm_GPCRs <533..605 CDD:475119 25/75 (33%)
TM helix 6 539..561 CDD:320189 8/21 (38%)
TM helix 7 573..598 CDD:320189 10/28 (36%)
chrm1XP_004913717.1 7tmA_mAChR_M1 48..493 CDD:341356 137/533 (26%)
TM helix 1 49..75 CDD:341356 10/25 (40%)
TM helix 2 82..108 CDD:341356 9/25 (36%)
TM helix 3 120..150 CDD:341356 13/29 (45%)
TM helix 4 162..185 CDD:341356 7/22 (32%)
TM helix 5 207..236 CDD:341356 8/73 (11%)
TM helix 6 422..452 CDD:341356 12/29 (41%)
TM helix 7 461..486 CDD:341356 10/24 (42%)

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