DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrR and htr1fb

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:XP_005159986.2 Gene:htr1fb / 100004819 ZFINID:ZDB-GENE-090312-140 Length:372 Species:Danio rerio


Alignment Length:500 Identity:135/500 - (27%)
Similarity:208/500 - (41%) Gaps:169/500 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 ILIAVFATFI-VVTVIGNTLVILAILTTRRLRTITNCFVMSLAVADLLVGIFVMPPAVAVHLIGS 181
            ||:::..:|: |.|...|:|||.|||.||:|....|..:.||||.||||.:.|||.::......:
Zfish    24 ILLSLTLSFLAVATTAINSLVITAILITRKLHQPANYLICSLAVTDLLVAVLVMPVSIVYIAEET 88

  Fly   182 WQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIVWLLAL 246
            |.||.::|.:|:.:||..||.|||.|.||::|||.|:|..:.||:||..|| |::.||.:|.|::
Zfish    89 WVLGPIVCHLWLGVDVTCCTCSILHLAAIALDRYRAITDAVAYSQKRTYKR-AIVTILSLWTLSI 152

  Fly   247 AITCPPMLGW-------YEPGRRDLRECRYNQNE-GYVIFSAMGSFFIPMAVMIYVYARISCVIA 303
            .::.||:: |       ::.|:|:..:|....:. .:.::|..|:|:||:|:::.:|        
Zfish   153 LVSLPPLV-WRKFPKVEFKDGKREPMDCLIEHDHVAFTVYSTFGAFYIPLALILVLY-------- 208

  Fly   304 SRHDNMTDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQATSRTFSNQTIAKELQDMMLSD 368
                           :|.|.||::              .|.|:.:|| ...||::..:...|.||
Zfish   209 ---------------YKIYKAAEM--------------LRNRRGSSR-LVKQTVSSVMLPGMSSD 243

  Fly   369 SDNCAAMGAGGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGCYELTRPSSLKRASTA 433
            .|                             :||                    .|.|.      
Zfish   244 KD-----------------------------IAL--------------------SPDSF------ 253

  Fly   434 STTITTMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLSQPPRTHSFRHSHGERDRERLRSHHHH 498
                                                    .|...||  |....|.||:|     
Zfish   254 ----------------------------------------CPIEKSF--SDPSTDGERVR----- 271

  Fly   499 PHYHHQAGVTTTSTSGNTSANTNSKSLSNRITSLKKENKTTQTLSIVVGGFIACWLPFFINYLIT 563
                      .||:|||.        :..|.....:|.:...||.:::|.|:.||||||:..:|.
Zfish   272 ----------ITSSSGNL--------IRVRRNPGARERRAALTLGLILGAFVVCWLPFFLKEVIV 318

  Fly   564 PFLAEHQASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRL 608
            ........|.:||..|||||:.||.|||.||..::.||:.||.:|
Zfish   319 NICPTCTTSAVLADFLTWLGYLNSLINPLIYTIFNEDFKKAFKKL 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 71/194 (37%)
TM helix 1 118..144 CDD:320189 12/26 (46%)
TM helix 2 151..177 CDD:320189 12/25 (48%)
TM helix 3 189..219 CDD:320189 16/29 (55%)
TM helix 4 232..255 CDD:320189 8/22 (36%)
TM helix 5 272..297 CDD:320189 7/25 (28%)
7tm_GPCRs <533..605 CDD:475119 29/71 (41%)
TM helix 6 539..561 CDD:320189 10/21 (48%)
TM helix 7 573..598 CDD:320189 14/24 (58%)
htr1fbXP_005159986.2 None

Return to query results.
Submit another query.