DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and Chrm2

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_112278.2 Gene:Chrm2 / 81645 RGDID:620023 Length:466 Species:Rattus norvegicus


Alignment Length:540 Identity:131/540 - (24%)
Similarity:218/540 - (40%) Gaps:112/540 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SMNSYLVSMAWPKSLAVAVFLVII-----LVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDW 121
            |.|:.|...:..|:..| ||:|::     |||::||.||::::...|.|:||.|.|:.:||..|.
  Rat     7 SSNNGLAITSPYKTFEV-VFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADL 70

  Fly   122 LVGTCVMPPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKR 186
            ::|...|....:..:.|.|..|.::||:|::||.::.:.|:::|..||.|||..||:||||..||
  Rat    71 IIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKR 135

  Fly   187 RSKRLALLMILVVWITALSITCPPYLGW-YEVGRHQAEFVDC--RYNQNKGYVVFSAMGSFFIPL 248
            .:| :|.:||...|:.:..:..|..|.| :.||....|..:|  ::..|......:|:.:|::|:
  Rat   136 TTK-MAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAVTFGTAIAAFYLPV 199

  Fly   249 TVMLYVYVKIGYVLTSRRQRIVRDAYSERTADYD------VDGDNFISESEHYHCTPTKWLPNRK 307
            .:|..:|..|.....||    ::....|..|:.|      |.| ..:..:.:.       :|...
  Rat   200 IIMTVLYWHISRASKSR----IKKEKKEPVANQDPVSPSLVQG-RIVKPNNNN-------MPGGD 252

  Fly   308 SRWRFNSLHD--PPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPT 370
            .....|.:.:  .|....|....:|.:         |.||...|:.:...:.:.|..:|..    
  Rat   253 GGLEHNKIQNGKAPRDGVTENCVQGEE---------KESSNDSTSVSAVASNMRDDEITQD---- 304

  Fly   371 FYELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTV 435
                 |.:..:||.|....:.|.  .|:.        :.|:|...|.|          |.|:.||
  Rat   305 -----ENTVSTSLGHSRDDNSKQ--TCIK--------IVTKAQKGDVC----------TPTSTTV 344

  Fly   436 ALETNEKLEAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTK--------- 491
            .|.                              ||.||......:......|..||         
  Rat   345 ELV------------------------------GSSGQNGDEKQNIVARKIVKMTKQPAKKKPPP 379

  Fly   492 -RDSKTAKTLTIVMGGLIACWLPFFVYYLLIPFLPRPAVLEDLMFGFTWIGWVNCAINPFIYAFY 555
             |:.|..:|:..::...|..|.|:.|..|:..|. .|.:...:.....|:.::|..|||..||..
  Rat   380 SREKKVTRTILAILLAFIITWAPYNVMVLINTFC-APCIPNTVWTIGYWLCYINSTINPACYALC 443

  Fly   556 NPDFRTAFWRLTCRPICKQK 575
            |..|:..|..|.   :|..|
  Rat   444 NATFKKTFKHLL---MCHYK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 66/199 (33%)
TM helix 1 78..101 CDD:410628 11/27 (41%)
TM helix 2 110..132 CDD:410628 7/21 (33%)
TM helix 3 148..170 CDD:410628 7/21 (33%)
TM helix 4 194..210 CDD:410628 3/15 (20%)
TM helix 5 233..256 CDD:410628 4/22 (18%)
7tm_GPCRs <491..563 CDD:475119 20/81 (25%)
TM helix 6 497..519 CDD:320098 5/21 (24%)
TM helix 7 531..556 CDD:320098 7/24 (29%)
Chrm2NP_112278.2 7tmA_mAChR_M2 24..451 CDD:320424 122/508 (24%)
TM helix 1 25..51 CDD:320424 9/25 (36%)
TM helix 2 58..84 CDD:320424 7/25 (28%)
TM helix 3 96..126 CDD:320424 12/29 (41%)
Important for signaling 120..122 1/1 (100%)
TM helix 4 138..161 CDD:320424 6/23 (26%)
TM helix 5 183..212 CDD:320424 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..289 14/87 (16%)
TM helix 6 380..410 CDD:320424 8/29 (28%)
TM helix 7 419..444 CDD:320424 7/24 (29%)
Important for signaling 436..440 2/3 (67%)

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