DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and hrh2a

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001038803.2 Gene:hrh2a / 735303 ZFINID:ZDB-GENE-070531-4 Length:369 Species:Danio rerio


Alignment Length:512 Identity:121/512 - (23%)
Similarity:180/512 - (35%) Gaps:235/512 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LAVAVFL-VIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYITGT 139
            :|:||.| |:||:||.||.||.|||..|||||.|||||:::||:||:|:|..|:|.|.:..:||.
Zfish     5 IALAVTLSVLILLTVSGNILVCLAVYATRRLRNVTNCFIVSLAVTDFLLGALVLPFSTLYQVTGD 69

  Fly   140 WRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILVVWITAL 204
            |..|...|:|:||||::||:.|||:|.|||||||.|||.||.|.......|:..: :..:|:.::
Zfish    70 WPLGAHFCNIYISLDVMLCTASILNLFAISLDRYFAVTAPLRYPMLVLPWRVGAI-LATIWLVSV 133

  Fly   205 SIT-CPPYLGW---------YEVGRHQAEFVDCRYNQNKGYVVFSAMGSFFIPLTVMLYVYVKIG 259
            .:: .|.:|||         ...|.|..   |||:..|..|.:..|..:|::||..|.:.|.::.
Zfish   134 GVSFVPIHLGWNTRDLSVQNIREGDHAR---DCRFELNPTYAIVDAFSTFYLPLLAMCWSYHRVF 195

  Fly   260 YVLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFNSLHDPPPSAAT 324
            .:...|.:||:                                                      
Zfish   196 RIARMRAKRII------------------------------------------------------ 206

  Fly   325 NAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSAI 389
             :..:|..||                     .||...||                          
Zfish   207 -STRRGSTSS---------------------QGVTILTL-------------------------- 223

  Fly   390 SCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQ 454
                                                                             
Zfish   224 ----------------------------------------------------------------- 223

  Fly   455 RSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYL 519
                                                 |:.|...||.:|:|..:.||.|:|.::.
Zfish   224 -------------------------------------REHKATVTLAVVLGAFVVCWFPYFTFFT 251

  Fly   520 LI--------PFLPRPAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRLTC 568
            ::        |...:..||        |:|:.|.|:||.:||..|.|||:|:.:|.|
Zfish   252 IMGIRNEENPPQTAQSVVL--------WLGYANSALNPVLYATLNRDFRSAYAKLLC 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 84/202 (42%)
TM helix 1 78..101 CDD:410628 15/23 (65%)
TM helix 2 110..132 CDD:410628 11/21 (52%)
TM helix 3 148..170 CDD:410628 13/21 (62%)
TM helix 4 194..210 CDD:410628 1/16 (6%)
TM helix 5 233..256 CDD:410628 6/22 (27%)
7tm_GPCRs <491..563 CDD:475119 25/79 (32%)
TM helix 6 497..519 CDD:320098 8/21 (38%)
TM helix 7 531..556 CDD:320098 8/24 (33%)
hrh2aNP_001038803.2 7tmA_Histamine_H2R 5..295 CDD:320179 118/505 (23%)
TM helix 1 6..32 CDD:320179 16/25 (64%)
TM helix 2 39..66 CDD:320179 13/26 (50%)
TM helix 3 77..107 CDD:320179 20/29 (69%)
TM helix 4 119..139 CDD:320179 2/20 (10%)
TM helix 5 168..198 CDD:320179 8/29 (28%)
TM helix 6 223..253 CDD:320179 11/157 (7%)
TM helix 7 263..288 CDD:320179 10/32 (31%)

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