DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and Gpr84

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001102979.1 Gene:Gpr84 / 688730 RGDID:1585277 Length:396 Species:Rattus norvegicus


Alignment Length:547 Identity:114/547 - (20%)
Similarity:181/547 - (33%) Gaps:183/547 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SMNSYLVSMAWPKSLAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTC 126
            :.:.|..|:...:..||...:|:.....|||.|.:||:....:|||..|..:.||.:.|.|..|.
  Rat     8 NFSCYHESVLGYRYFAVIWGMVVAATGTVGNVLTLLALAIRPKLRTRFNLLIANLTLADLLYCTL 72

  Fly   127 VMPPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRL 191
            :.|.||..|:...||.|.|.|.|:..|.....|.|||:||.|:|.|||.:..|..:.:...:|.:
  Rat    73 LQPFSVDTYLHLHWRTGAIFCRIFGLLLFTSNSVSILTLCLIALGRYLLIAHPKLFPQVFSAKGI 137

  Fly   192 ALLMI--LVVWITALS----------ITCPPYLGWYEVGRHQAEFVDCRYNQNKG--YVVFSAMG 242
            .|.::  .||.:|:.:          :.|                 .|.:::.:|  |... .||
  Rat   138 VLALVGSWVVGVTSFAPLWNVYVLVPVVC-----------------TCSFDRVRGRPYTTI-LMG 184

  Fly   243 SFFIPLTVMLYVYVKIGYVLTSRR-QRIVR--DAYSERTA---DYDVDGDNFISESEHYHCTPTK 301
            .||    |:....|.:.|.|..|: :|..|  |.|..:.|   .:.|.|                
  Rat   185 IFF----VVGLSSVGVFYCLIHRQVKRAARALDKYGLQEASMRSHQVSG---------------- 229

  Fly   302 WLPNRKSRWRFNSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFK 366
                                  |:.|..||...:.          :|.|..|...|:        
  Rat   230 ----------------------THEAVPGHFQELD----------SGLASRGPSEGI-------- 254

  Fly   367 HQPTFYELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTT 431
                                                                    .|...:..|
  Rat   255 --------------------------------------------------------SSEPVSAAT 263

  Fly   432 TNTVALETNEKLEAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKT 496
            |.|:..:::|..: :..:|..||.|.......|....|:.|.:             ..|...|:.
  Rat   264 TQTLEGDSSEAGD-QGMRKAAQQISERSLPEVHRKTGGAAGAR-------------RATDAPSEF 314

  Fly   497 AKTLTIVMGGLIACWLPFFVYYLLIPFLP----RPAVLEDLMFGFTWIGWVNCAINPFIYAFYNP 557
            .| :|.:...:..|::..::.:||:..|.    .|.|:..:....||:   |..|||.:||..|.
  Rat   315 GK-VTRMCFAVFLCFVLSYIPFLLLNILDARGRAPRVVHMVAANLTWL---NSCINPVLYAAMNR 375

  Fly   558 DFRTAFWRLTCRPICKQKRPPNHLAMF 584
            .||.|:..:.       ||.|.....|
  Rat   376 QFRQAYGSIL-------KRGPQSFRRF 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 59/206 (29%)
TM helix 1 78..101 CDD:410628 8/22 (36%)
TM helix 2 110..132 CDD:410628 7/21 (33%)
TM helix 3 148..170 CDD:410628 9/21 (43%)
TM helix 4 194..210 CDD:410628 4/27 (15%)
TM helix 5 233..256 CDD:410628 7/24 (29%)
7tm_GPCRs <491..563 CDD:475119 20/75 (27%)
TM helix 6 497..519 CDD:320098 3/21 (14%)
TM helix 7 531..556 CDD:320098 8/24 (33%)
Gpr84NP_001102979.1 7tmA_GPR84-like 21..381 CDD:320338 107/511 (21%)
TM helix 1 22..48 CDD:320338 9/25 (36%)
TM helix 2 55..78 CDD:320338 7/22 (32%)
TM helix 3 93..123 CDD:320338 14/29 (48%)
TM helix 4 137..155 CDD:320338 4/17 (24%)
TM helix 5 175..200 CDD:320338 9/29 (31%)
TM helix 6 312..342 CDD:320338 6/30 (20%)
TM helix 7 349..374 CDD:320338 9/27 (33%)

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