DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and chrm3a

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_021328763.1 Gene:chrm3a / 571679 ZFINID:ZDB-GENE-090410-4 Length:595 Species:Danio rerio


Alignment Length:592 Identity:139/592 - (23%)
Similarity:242/592 - (40%) Gaps:121/592 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GGDVMATGAGAGKLGVPSMNSYLVSMAWPKSLAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVT 109
            |.:..|.|.....||..|:        |...|.|....::.|:|::||.||:::....|:|:||.
Zfish    47 GSNAEAEGQSYDPLGGHSL--------WQVILIVVFTGLLSLITIIGNILVMVSFKVNRQLKTVN 103

  Fly   110 NCFVMNLAITDWLVGTCVMPPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYL 174
            |.|:::||:.|.::|...|.......:.|.|..|...||:|:::|.:..:.|:::|..||.|||.
Zfish   104 NYFLLSLAVADLIIGVISMNLYTAYIVMGQWAMGNWACDLWLAIDYVASNASVMNLLVISFDRYF 168

  Fly   175 AVTQPLTYSKKRRSKRLALLMILVVWITALSITCPPYLGW-YEVGRHQAEFVDCRYNQNKGYVVF 238
            ::|:||||..||.:|| |.:||.:.|..:|.:..|..|.| |.||:....       |:|.|:.|
Zfish   169 SITRPLTYRAKRTTKR-AGVMIGLAWFVSLILWAPAILFWQYFVGQRTVP-------QDKCYIQF 225

  Fly   239 ---------SAMGSFFIPLTVMLYVYVKIGYVLTSRRQR--------------IVRDAY------ 274
                     :||.:|::|:|:|..:|.:| |..|..|.|              :.|..:      
Zfish   226 LSEPIITFCTAMAAFYLPVTIMSVLYWRI-YKETENRSRELAGLQGSGGRFGGVERPRFHLHATR 289

  Fly   275 --SERTADYDVDGDNFISESEH-----YHCTPTKWLPNRKSRWRFNSLHDPPPSAATNAAAKGHQ 332
              |...:.:::........|.|     :||    |      .|:         |..::.:....:
Zfish   290 GSSRSCSSFELGQPGHKKASVHSLSGRFHC----W------GWK---------SGGSDKSGPNRE 335

  Fly   333 SSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSAISCKYGGPC 397
            :. :.|..|..::..|.:...:|:...|::.....:..|..::.:..:.:.::....||:.....
Zfish   336 AD-QSSSDSWNNNDAGLSADHSGSSDEDESAPSTTRAIFSIVLSLPGVRAAVNSQVTSCEELDTE 399

  Fly   398 MHSTPSGMHYVGTEASFSDTCLGGN-----------------VSNNTTTTTTNTVALETNE---- 441
            .....|.......:.|.|.:...||                 .:.:|||.:|||.....:.    
Zfish   400 EDPLRSAEEKDSRDGSISRSVTNGNKRFVGGMSKVQSMSAIQPTTDTTTDSTNTTIKSPSAPITF 464

  Fly   442 KLEAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGG 506
            |..|.||:...:.|:.....                       .|:|..| :.|.|:||:.::..
Zfish   465 KEAALAKRFAARARTQITKR-----------------------KRMSLIK-EKKAAQTLSAILFA 505

  Fly   507 LIACWLPFFVYYLLIPFLPRPAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAF-WRLTCRP 570
            .|..|.|:.:..|:..|. ...:.|:|.....|:.:||..:||..||..|..||:.| ..|.||.
Zfish   506 FIITWTPYNIMVLVNTFC-NGCIPENLWALGYWLCYVNSTVNPMCYALCNKTFRSTFKMILLCRW 569

  Fly   571 ICKQKRP 577
            ..|:.:|
Zfish   570 DQKKSKP 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 68/215 (32%)
TM helix 1 78..101 CDD:410628 7/22 (32%)
TM helix 2 110..132 CDD:410628 7/21 (33%)
TM helix 3 148..170 CDD:410628 6/21 (29%)
TM helix 4 194..210 CDD:410628 4/15 (27%)
TM helix 5 233..256 CDD:410628 9/31 (29%)
7tm_GPCRs <491..563 CDD:475119 22/71 (31%)
TM helix 6 497..519 CDD:320098 6/21 (29%)
TM helix 7 531..556 CDD:320098 9/24 (38%)
chrm3aXP_021328763.1 7tm_GPCRs 66..>258 CDD:475119 67/200 (34%)
TM helix 1 71..95 CDD:410628 7/23 (30%)
TM helix 2 104..126 CDD:410628 7/21 (33%)
TM helix 3 142..164 CDD:410628 6/21 (29%)
TM helix 4 187..203 CDD:410628 4/15 (27%)
TM helix 5 229..252 CDD:410628 6/22 (27%)
7tm_GPCRs <462..570 CDD:475119 33/132 (25%)
TM helix 5 462..483 CDD:410628 5/20 (25%)
TM helix 6 496..518 CDD:410628 6/21 (29%)
TM helix 7 529..554 CDD:410628 9/24 (38%)

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