DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and zgc:162592

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001076297.1 Gene:zgc:162592 / 561993 ZFINID:ZDB-GENE-030131-5400 Length:375 Species:Danio rerio


Alignment Length:221 Identity:52/221 - (23%)
Similarity:95/221 - (42%) Gaps:36/221 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 KSLAVAVFLVIILVTVVGNTLVILAVLT-----TRRLRTVTNCFVMNLAITDWLVGTCVMPPSVV 133
            :.:.:.:..|:.::..:||..|::.:.:     :|..|    .|:::|...|......:||.::.
Zfish    27 RPIKIGIISVLGVMITLGNIAVVMVIASAVSGWSRNSR----YFLLSLTGADSAFALLIMPLNLC 87

  Fly   134 L-----YITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLAL 193
            :     |..|...|    |.|....:..:.|..:.:|..|||:||:||..||.|| ...::|.||
Zfish    88 VSLIKEYNAGPDPF----CHIVAFFNATIYSTCMYTLATISLERYIAVFYPLKYS-VLLTRRRAL 147

  Fly   194 LMILVVWITALSITCPPYL--------GWYEVGRHQAEFVDCR--YNQNKGYVVFSAMGSFFIPL 248
            |:|...|:      .||.|        |..||...:|..| |.  |:.|..|.:......||...
Zfish   148 LLISFSWV------FPPVLLFPISFPAGIIEVHFSRASLV-CNPLYSSNVSYSLTLTCFIFFPCS 205

  Fly   249 TVMLYVYVKIGYVLTSRRQRIVRDAY 274
            .:|.:..:::......:|.::.|.::
Zfish   206 AIMTFCNLRLWVAAKRQRSKLRRHSW 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 51/211 (24%)
TM helix 1 78..101 CDD:410628 4/22 (18%)
TM helix 2 110..132 CDD:410628 5/21 (24%)
TM helix 3 148..170 CDD:410628 4/21 (19%)
TM helix 4 194..210 CDD:410628 3/15 (20%)
TM helix 5 233..256 CDD:410628 4/22 (18%)
7tm_GPCRs <491..563 CDD:475119
TM helix 6 497..519 CDD:320098
TM helix 7 531..556 CDD:320098
zgc:162592NP_001076297.1 7tm_classA_rhodopsin-like 30..299 CDD:410626 52/218 (24%)
TM helix 1 30..55 CDD:410626 4/24 (17%)
TM helix 2 63..90 CDD:410626 6/30 (20%)
TM helix 3 102..132 CDD:410626 10/29 (34%)
TM helix 4 145..164 CDD:410626 8/24 (33%)
TM helix 5 189..214 CDD:410626 5/24 (21%)
TM helix 6 240..265 CDD:410626
TM helix 7 274..299 CDD:410626
Blue background indicates that the domain is not in the aligned region.

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