DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and chrm2b

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_068075506.1 Gene:chrm2b / 555516 ZFINID:ZDB-GENE-090410-3 Length:466 Species:Danio rerio


Alignment Length:540 Identity:126/540 - (23%)
Similarity:208/540 - (38%) Gaps:162/540 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYITGTW 140
            |.|....::.|:|::||.||:|::...|.|:||.|.|:.:||..|..:|...|....|..:||.|
Zfish    33 LIVLGLSILSLITIIGNVLVMLSIKVNRNLQTVNNYFLFSLACADLFIGVFSMNLYTVYIVTGHW 97

  Fly   141 RFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILVVWITALS 205
            ..|.::||:|::||.::.:.|:::|..||.|||..||:||:|..||..| :|.:||...||.:..
Zfish    98 PLGALVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLSYPVKRTHK-MAGMMIAAAWILSFI 161

  Fly   206 ITCPPYLGW-YEVGRHQAEFVDCRYNQ--NKGYVVF-SAMGSFFIPLTVMLYVYVKIGYVLTSRR 266
            :..|..|.| :..|.......:| |.|  :...|.| :|:.:|::|:..|..:|.:|.....||.
Zfish   162 LWAPAILFWQFITGSRTVPEGEC-YIQFFSNAVVTFGTAIAAFYLPVITMTILYWQISKASRSRV 225

  Fly   267 QRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFNSLHDPPPSAATNAAAKGH 331
            :|  ||                                ||                         
Zfish   226 RR--RD--------------------------------NR------------------------- 231

  Fly   332 QSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSAISCKYGGP 396
                   :.|:.|:..|.||.|....:..|                                   
Zfish   232 -------RVSRVSNDGGQAGLGNERNMDRK----------------------------------- 254

  Fly   397 CMHSTPSGMHYVGTEASFSDTCLG-----------GNVSNNTTTTTTNTVALETNEKLEAEAKQ- 449
               ||..|...|..:.|.|||..|           |:|..::.......|::.||..:.|...| 
Zfish   255 ---STQEGEEMVSRKQSASDTTTGEERDSENDSISGSVLASSNQRDDEAVSISTNGDIRARQNQS 316

  Fly   450 --------------KQQQQRSSFDHHHPHAHHHG-SHGQQ----------SHHNHHHRMPMRVST 489
                          |...|:...:.:..::...| ::|::          |.|:.     .|.|:
Zfish   317 ASLATESWVRFTCFKTASQKDLQNTYKVNSESQGMTNGKERLSLVSQKIISPHSQ-----KRKSS 376

  Fly   490 TKRDSKTAKTLTIVMGGLIACWLPFFVYYLLIPF----LPRPAVLEDLMFGFTWIGWVNCAINPF 550
            :.|:.|..:|:..::......|.|:.|..|:..|    :|...    .:||: |:.::|..:||.
Zfish   377 SSREKKVTRTIMAILVAFATTWTPYNVMVLINTFCSDCIPNTV----WIFGY-WLCYINSTVNPA 436

  Fly   551 IYAFYNPDFRTAFWR-LTCR 569
            .||..|..|:..|.: |||:
Zfish   437 CYALCNVTFKNTFKQLLTCK 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 67/195 (34%)
TM helix 1 78..101 CDD:410628 8/22 (36%)
TM helix 2 110..132 CDD:410628 7/21 (33%)
TM helix 3 148..170 CDD:410628 7/21 (33%)
TM helix 4 194..210 CDD:410628 4/15 (27%)
TM helix 5 233..256 CDD:410628 6/23 (26%)
7tm_GPCRs <491..563 CDD:475119 19/75 (25%)
TM helix 6 497..519 CDD:320098 4/21 (19%)
TM helix 7 531..556 CDD:320098 8/24 (33%)
chrm2bXP_068075506.1 7tmA_mAChR_M2 32..449 CDD:320424 122/531 (23%)
TM helix 1 33..59 CDD:320424 9/25 (36%)
TM helix 2 66..92 CDD:320424 8/25 (32%)
TM helix 3 104..134 CDD:320424 12/29 (41%)
TM helix 4 146..169 CDD:320424 7/23 (30%)
TM helix 5 191..220 CDD:320424 8/28 (29%)
TM helix 6 264..408 CDD:320424 27/148 (18%)
TM helix 7 417..442 CDD:320424 8/29 (28%)

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