DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and Oamb

DIOPT Version :9

Sequence 1:NP_001262682.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:655 Identity:159/655 - (24%)
Similarity:248/655 - (37%) Gaps:219/655 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SMAWPK-----SLAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVM 128
            |:.|.:     ||||..|:.::::.  ||.|||.||..:.:||:|||.|::|||:.|.|||..|:
  Fly    12 SVKWTEPANLISLAVLEFINVLVIG--GNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVL 74

  Fly   129 PPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLAL 193
            |.|....:...|.||.:.|.||:::|:.:|:.|||:|||||||||:|||:|:||.....:|: |.
  Fly    75 PFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKK-AK 138

  Fly   194 LMILVVWITALSITCPPYLGW----------YEVGRH---------------------------- 220
            .:|..:|:.:..|..||.:||          |..|.|                            
  Fly   139 SLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEAS 203

  Fly   221 --------------------------QAEF----VD----------------------------- 226
                                      .||.    :|                             
  Fly   204 LPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLL 268

  Fly   227 ------------------CRYNQNKGYVVFSAMGSFFIPLTVMLYVYVKIGYVLTSRRQRIVRDA 273
                              |....::|||::||:|||:||:.|||:.|.:| |....|..|.:...
  Fly   269 NAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRI-YRAAVRTTRAINQG 332

  Fly   274 YSERTADYDVDGDNF--------------ISESEHYHC------------TPTKWLPNRKSRWRF 312
            :........: |..|              .::.:..|.            ||:   |.|.|::..
  Fly   333 FKTTKGSKGI-GSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPS---PERLSKYAT 393

  Fly   313 NSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEV 377
            ..||              |...:|.| .|..||...:..||             |....:|..:.
  Fly   394 RRLH--------------HHDKIKIS-VSYPSSENISELAG-------------HGDVGHERRQS 430

  Fly   378 SRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEK 442
            ......:|.:..:.:      .||.|.::....:...:.:|.                 |:..:.
  Fly   431 GNALFAVHYNGTNGR------ESTESQLYRQQQQHGVASSCY-----------------LQVGKG 472

  Fly   443 L-EAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGG 506
            | |...:|....:.....|..|.....|          ...:..:|...:.::|.||||.|::|.
  Fly   473 LPELARRQSNTSEAGGSGHSRPANKKMG----------RRNIKAQVKRFRMETKAAKTLAIIVGM 527

  Fly   507 LIACWLPFFVYYLLIPFLPRPAVLEDLMFG-FTWIGWVNCAINPFIYAFYNPDFRTAFWRLTCRP 570
            .|.||.|||..|::.||.  ...::.|:|. ..|:|:.|.|:||.|||.::.|||.||.|:.||.
  Fly   528 FIFCWCPFFTMYIIRPFC--QDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRC 590

  Fly   571 ICKQK 575
            .|.::
  Fly   591 FCSRQ 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_001262682.1 7tm_4 82..>212 CDD:304433 56/129 (43%)
7tm_1 91..>277 CDD:278431 83/300 (28%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 55/127 (43%)
7tm_1 37..>181 CDD:278431 61/144 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460623
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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