DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and CG12290

DIOPT Version :9

Sequence 1:NP_001262682.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001287540.1 Gene:CG12290 / 43182 FlyBaseID:FBgn0039419 Length:798 Species:Drosophila melanogaster


Alignment Length:696 Identity:130/696 - (18%)
Similarity:214/696 - (30%) Gaps:278/696 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 VFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYITG------ 138
            :.|.::||:.:.|.|.:.|...|..|||..|.|.:||...: |:|.|::.|::.|.:.|      
  Fly     6 LILALLLVSFLINLLALCAFWITPGLRTTANRFTINLLAIN-LIGCCILAPTLFLGLPGKSAEAS 69

  Fly   139 -----TWRF-------------------------------------------------------- 142
                 |..|                                                        
  Fly    70 TSNAETLEFFSKPGNHQVILRRNGQLVEQDGVVVRRNISENGDTVETFFKCNATYCRELTIDERG 134

  Fly   143 --GWILCD---------------------------IWISLDILLCSGSILSLCAISLDRYLAVTQ 178
              |:::.:                           .| |:|:....|::..|..:. |.:.|||.
  Fly   135 DGGFVITETETHEENLSAFESLPTEAPILPPVQLRCW-SIDMTAALGALAVLLVVG-DTWCAVTD 197

  Fly   179 PLTYSKKRRSKRLALLMILVVWITALSITCPPYLGWYEVGRHQAEFVDCRYNQNK----GYVVFS 239
            ||.| ..|.|.....:.|.:.|:..:....   |..:.|...:|   |..:::.:    .|...|
  Fly   198 PLRY-HSRISGVKTWIFIALTWVVGILFGA---LSAFRVLDFEA---DALFSRQRRLAVTYFNIS 255

  Fly   240 AMGSFFIPLTVMLYVYVKI----GYVL------------TSRRQR------IVRDAYSERTADYD 282
            :..|.|..:...:|..|.|    |:|.            ...|.|      :::.|.: .||...
  Fly   256 STNSIFGVVYASVYFIVIILLPFGFVCGMYWRIFSEARGNGLRMRQNGSSPLLQSALN-LTAGQQ 319

  Fly   283 VDGDNFISES--EHYHCTPTKWLPNRKSRWRFNSLHDPPPSAATNAAAKGHQSSV---------- 335
            ....|..|.|  .|.|                         :.::|::.|..||:          
  Fly   320 AAQANQFSNSLCVHRH-------------------------SISSASSHGGNSSLGLGGLQMQID 359

  Fly   336 ------KCSKCSKCSSAT----------GTAGAGAGAG-----VVDKTLTFKHQPTFYELVEVS- 378
                  ....|.:..||.          |.:.|.:|||     |.:.:|:.::|.....|...| 
  Fly   360 QRQQPRSSPSCLRRDSAAKVLLPTISDDGGSDAESGAGVQLMPVQEHSLSDRNQNIMLTLQTASG 424

  Fly   379 --------RLSSLIHCSAISCK-----YGGPCMHSTPSGMHYVGTEA---SFSDTCLGGNVSNNT 427
                    |...|:..|:...:     .|...:||:|:...|  ||.   |.|:.|...::..:.
  Fly   425 EIKRNYSARQLPLLGTSSQDLRETNRLQGIRQVHSSPNLHKY--TELRQDSLSEECGSPHLLGHA 487

  Fly   428 TTTTTNTVALETNEKLEAEAKQKQQQQRSSFDH----HHPHAHHHGSHGQQSHHNHHHRMPM--- 485
                                 |:||||:....|    ||.|..||.......|..|.|.:.:   
  Fly   488 ---------------------QRQQQQQLHLQHQQQQHHHHQQHHPHFSSPRHQQHGHALQIPAI 531

  Fly   486 ---------------RVSTT------KRDSKTAKTLTIVMGGLIACWLPFFVYYLLIPFLPRPAV 529
                           |:|..      :.:|:.|:...:|:...:..:|||.:..||      .:.
  Fly   532 HASPKALSYMSSLRHRLSNASSLFKYREESRAARISILVVVMFVVSYLPFGLLVLL------QSR 590

  Fly   530 LEDLMFGFTWIGWVNCAI---------NPFIYAFYNPDFRTAFWRL 566
            |....||    |....||         :|||:|:.|...|....||
  Fly   591 LSAANFG----GSSQLAIFMILLANLSSPFIFAYRNKRVRRGVKRL 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_001262682.1 7tm_4 82..>212 CDD:304433 39/225 (17%)
7tm_1 91..>277 CDD:278431 52/307 (17%)
CG12290NP_001287540.1 7tm_1 <190..>305 CDD:278431 26/121 (21%)
7tm_1 <537..617 CDD:278431 17/89 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24248
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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