DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and Octalpha2R

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster


Alignment Length:712 Identity:171/712 - (24%)
Similarity:273/712 - (38%) Gaps:196/712 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PDAMLPYSKLLST----ALTVASGNSNSSDGTLLL--------IQTSAAPGGDVMATGAGAGKLG 59
            ||.......|||.    .|...||..|.:|....|        :|.:|.......|:||.:|.|.
  Fly    29 PDNATLNPPLLSVDGQLTLPPGSGYVNVNDTIFFLNGSFYNSSLQLAAGFYNQSSASGATSGNLT 93

  Fly    60 VPSMNSYLVSMAWPKS-------LAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLA 117
            .|:.........:|..       :|..:..:::::.||||.|||:|:.|.:.|:.:.|.|:.:||
  Fly    94 NPNHTEVHWDGRYPSGYTLTHIVIASIIVTILMIIIVVGNMLVIIAIATEKSLKNIQNWFIASLA 158

  Fly   118 ITDWLVGTCVMPPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTY 182
            :.|:.:|..:||.|:...:.|.|.||...|||..::|:|||:.||::||.||||||.::|:.:.|
  Fly   159 VADFFLGLIIMPFSLANELMGYWIFGSWWCDIHSAMDVLLCTASIMNLCLISLDRYWSITKAVDY 223

  Fly   183 SKKRRSKRLALLMILVVWITALSITCPPYLGWYEVGRHQAEFVDCRYNQNKGYVVFSAMGSFFIP 247
            .|.|...| |.:||..|||.:..|..||.||| :|...:.....|..:::.|||::||:|||:||
  Fly   224 LKSRTPAR-AAVMITAVWIMSALICIPPLLGW-KVKMPEGPLPKCELSEDIGYVLYSALGSFYIP 286

  Fly   248 LTVMLYVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRF 312
            ..:|::||::|.:...:|.:|.:: .:..:|.:..|                |.:...:|..   
  Fly   287 SCIMVFVYIRIYFAAKARARRGIK-KHPRKTNNEQV----------------TSFTTAKKGT--- 331

  Fly   313 NSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSAT----------------GTAGAGAGAGVVDK 361
                .|.||::..:|.:.||.....:..:..:||:                .|:.||....|..:
  Fly   332 ----IPMPSSSGVSALQLHQQRQIATIETPPNSASLPMQIPTVTMDLASDISTSEAGELEAVAAQ 392

  Fly   362 TLTFKHQPTFYELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDT--------- 417
            |:.....|.......|         :.:|...|||.....|........:.|...|         
  Fly   393 TVLAYANPNGAGTNSV---------TVVSSGNGGPGASGVPPSSPKETLQVSTIATGRVGLNVPV 448

  Fly   418 --CLGGNVSNNTTTTTTNTVALE------------------------------------------ 438
              .:|.|.|.|.......|||::                                          
  Fly   449 PPSMGSNSSINVLNNNNGTVAMDGGATAAGGGNGSAVATPGGLQQTGGNELRVSPIAGRCRALSV 513

  Fly   439 ------------------------------------------TNEKLEAEAKQKQQQQRSSFDHH 461
                                                      :|::...|||...:.|:||    
  Fly   514 GVDTDMVSEFDPSSSDSGVVSRCAVVKPLKFRLCQPIFGRKSSNQQRRNEAKAAAKNQQSS---- 574

  Fly   462 HPHAHHHGSHGQQSHHNHHHRMPM---------------------RVSTTKRDSKTAKTLTIVMG 505
                 ...|..||.......:..:                     |....|::.:....|.::||
  Fly   575 -----GVASKNQQQQQQQQQQQVVKSELEPAIPKTPKPRDPEKEKRRIARKKEKRATLILGLIMG 634

  Fly   506 GLIACWLPFFVYYLLIPFLPRPAVLEDLMFGFT-WIGWVNCAINPFIYAFYNPDFRTAFWRL 566
            ..||||||||..|:|:|.......:.:..|... |:|::|.|:||.||..:|.|||.||.|:
  Fly   635 SFIACWLPFFFLYILVPACSSHCNIPESAFAVAFWLGYMNSALNPAIYTIFNKDFRRAFRRI 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 75/191 (39%)
TM helix 1 78..101 CDD:410628 8/22 (36%)
TM helix 2 110..132 CDD:410628 8/21 (38%)
TM helix 3 148..170 CDD:410628 11/21 (52%)
TM helix 4 194..210 CDD:410628 6/15 (40%)
TM helix 5 233..256 CDD:410628 12/22 (55%)
7tm_GPCRs <491..563 CDD:475119 28/72 (39%)
TM helix 6 497..519 CDD:320098 11/21 (52%)
TM helix 7 531..556 CDD:320098 9/25 (36%)
Octalpha2RNP_001262715.1 7tmA_alpha2_AR 132..>307 CDD:320187 72/176 (41%)
TM helix 2 150..176 CDD:320187 9/25 (36%)
TM helix 3 188..218 CDD:320187 17/29 (59%)
TM helix 4 230..253 CDD:320187 10/23 (43%)
TM helix 5 271..300 CDD:320187 14/28 (50%)
7tm_GPCRs <616..693 CDD:475119 28/76 (37%)
TM helix 6 626..648 CDD:410628 11/21 (52%)
TM helix 7 661..686 CDD:410628 9/24 (38%)

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