DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and Octbeta2R

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster


Alignment Length:583 Identity:160/583 - (27%)
Similarity:231/583 - (39%) Gaps:208/583 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AMLPYSKLLSTALTVASGNSNSSDGTLLLIQTSAAP------------GGDVMATGAGAG----- 56
            |||..:..|  |.|.:|..||||.|.:.|...:|.|            |..:....:|||     
  Fly    74 AMLHTTNAL--AATGSSSASNSSTGGIALPLGTATPATHELNATQPFGGSGLNFNESGAGLSDHH 136

  Fly    57 --KLGVPSMNSYLVSMAWPKSLAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAIT 119
              :...|. ..:|.::.|  .....|.|:||:..:.||.|||::|:..|:||.:||.||::||:.
  Fly   137 HHQQHNPD-EDWLDNIVW--VFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMA 198

  Fly   120 DWLVGTCVMPPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSK 184
            |.:|....|..:..:.:||.|.|...|||:|.|||:...:.|||.||.||:|||.|:.:||.|..
  Fly   199 DIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPI 263

  Fly   185 KRRSKRLALLMILVVWIT-ALSITCPPYLGWYEVGRHQAEFV-----DCRYNQNKGYVVFSAMGS 243
            . .:||:..:|:|..||: ||....|.::|||...:|| :||     .|.:..||.|.|.|:..|
  Fly   264 S-MTKRVVGIMLLNTWISPALLSFLPIFIGWYTTPQHQ-QFVIQNPTQCSFVVNKYYAVISSSIS 326

  Fly   244 FFIPLTVMLYVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKS 308
            |:||.|:|::.|:           .|.|:|                               ||: 
  Fly   327 FWIPCTIMIFTYL-----------AIFREA-------------------------------NRQ- 348

  Fly   309 RWRFNSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYE 373
                                                               :|.|..:|..    
  Fly   349 ---------------------------------------------------EKQLMMRHGN---- 358

  Fly   374 LVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALE 438
                   :.|:|         .|.|.  |||      ||      |.|:.|:.|.|.        
  Fly   359 -------AMLMH---------RPSMQ--PSG------EA------LSGSGSSKTLTL-------- 385

  Fly   439 TNEKLEAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIV 503
              .::|.|              |.|....|                  :...||:.|.|:||.|:
  Fly   386 --HEVEQE--------------HTPTKDKH------------------LIKMKREHKAARTLGII 416

  Fly   504 MGGLIACWLPFFVYYLLIPFLPR---PAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAF 563
            ||..|.||||||::|.|......   |.::..::|   |||:.|..:||.|||::|.|||.||
  Fly   417 MGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILF---WIGYFNSTLNPLIYAYFNRDFREAF 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 76/197 (39%)
TM helix 1 78..101 CDD:410628 10/22 (45%)
TM helix 2 110..132 CDD:410628 8/21 (38%)
TM helix 3 148..170 CDD:410628 11/21 (52%)
TM helix 4 194..210 CDD:410628 6/16 (38%)
TM helix 5 233..256 CDD:410628 10/22 (45%)
7tm_GPCRs <491..563 CDD:475119 33/74 (45%)
TM helix 6 497..519 CDD:320098 13/21 (62%)
TM helix 7 531..556 CDD:320098 10/24 (42%)
Octbeta2RNP_001163596.2 7tmA_DmOct-betaAR-like 155..476 CDD:320194 136/495 (27%)
TM helix 1 155..181 CDD:320194 10/25 (40%)
TM helix 2 188..214 CDD:320194 9/25 (36%)
TM helix 3 226..256 CDD:320194 17/29 (59%)
TM helix 4 268..291 CDD:320194 8/22 (36%)
TM helix 5 315..344 CDD:320194 13/39 (33%)
TM helix 6 404..434 CDD:320194 17/29 (59%)
TM helix 7 444..469 CDD:320194 10/27 (37%)

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