DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrRII and mAChR-B

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster


Alignment Length:536 Identity:116/536 - (21%)
Similarity:200/536 - (37%) Gaps:154/536 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NSNSSDGTLLLIQTSAAPGGDVMATGAGAGKLGVPSMNSYLVSMAWPKSLAVAVFLVI-ILVTVV 90
            |:|    .||.::..::.||..|:..:...::..|.:..:.:   | :::.:|:.|.| |::||.
  Fly    93 NTN----LLLAVRNQSSDGGSTMSGSSSDSEILGPVLPPFAL---W-QTILIAICLAICIILTVG 149

  Fly    91 GNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYITGTWRFGWILCDIWISLDI 155
            ||.||:||.:..|.:|..:|.|:.:||.||.|:||..||...:..:.|.|..|.:|||:|:|:|.
  Fly   150 GNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLWLSVDY 214

  Fly   156 LLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILVVWITALSITCPPYLGW-YEVGR 219
            .:|..|..::..|::|||.:|.....| :..|::...:.|:.:.||....:......|| :..|:
  Fly   215 TVCLVSQYTVLLITIDRYCSVKIAAKY-RSWRTRTRVIYMVTITWIIPALLFFISIFGWEHFTGK 278

  Fly   220 HQAEFVDCRYNQNKGYVVFSAM--GSFFIPLTVMLYVYV---KIGYVLTSRRQRIVRDAYS---- 275
            .......|.....|..:..:|:  |.::..|.|:..:|.   |..|.:..|.:...|...|    
  Fly   279 RDLLPGQCAVQFLKDPIFNTALIIGYYWTTLIVLFVLYAGIYKTAYDMQKRSEAKQRKMQSMVAL 343

  Fly   276 -------------------ERTADYDVD--GDNFISESEHYHCTPT------------------- 300
                               |:.....|:  ||....:|.   ||..                   
  Fly   344 SAGAMSGMAGHAAGIGVIEEKILKTKVELAGDQTDLDSA---CTTVIKRLSGSGQANPLAVATEE 405

  Fly   301 --KWLPNRKSRWRFNSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTL 363
              |..|.::.          ..:|.....||..:::|...|..:.||                  
  Fly   406 VEKMTPEQRR----------ASAAKIQEEAKKREAAVDAEKSERSSS------------------ 442

  Fly   364 TFKHQPTF-----------YELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDT 417
                 |.|           .:|:...:|:::...|:|...:               |.:|:...|
  Fly   443 -----PAFDSDEESSVNQAQQLITQQKLNNMRKRSSIGLVF---------------GAQAALLAT 487

  Fly   418 CLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQRSSFDHHHPHA--------------HHH 468
            ...||:..:||          .::.:||..:....||     |||..:              |||
  Fly   488 RGKGNLQKSTT----------NSKSIEAMHQYHHHQQ-----HHHNQSPLQRAQSKEEMRSLHHH 537

  Fly   469 GSHGQQSHHNHHHRMP 484
             .:.||.||.||...|
  Fly   538 -QNQQQPHHQHHQNQP 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 59/198 (30%)
TM helix 1 78..101 CDD:410628 12/23 (52%)
TM helix 2 110..132 CDD:410628 11/21 (52%)
TM helix 3 148..170 CDD:410628 7/21 (33%)
TM helix 4 194..210 CDD:410628 3/15 (20%)
TM helix 5 233..256 CDD:410628 5/24 (21%)
7tm_GPCRs <491..563 CDD:475119
TM helix 6 497..519 CDD:320098
TM helix 7 531..556 CDD:320098
mAChR-BNP_649764.1 7tmA_mAChR_GAR-2-like 147..>323 CDD:320429 53/176 (30%)
TM helix 2 168..194 CDD:320429 11/25 (44%)
TM helix 3 206..236 CDD:320429 11/29 (38%)
TM helix 4 248..271 CDD:320429 3/22 (14%)
TM helix 5 293..322 CDD:320429 5/28 (18%)
7tm_GPCRs <932..1008 CDD:475119
TM helix 6 941..963 CDD:410628
TM helix 7 976..1001 CDD:410628
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.