DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and HTR1F

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_000857.1 Gene:HTR1F / 3355 HGNCID:5292 Length:366 Species:Homo sapiens


Alignment Length:505 Identity:133/505 - (26%)
Similarity:204/505 - (40%) Gaps:168/505 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 PKSLAVAVFLV-IILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYI 136
            |..:.|::.|. :.|:|...|:|||.|::.||:|....|..:.:||:||:||...|||.|:|..:
Human    21 PSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIV 85

  Fly   137 TGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILVVWI 201
            ..:|..|.::||||:|:||..|:.|||.|.||:||||.|:|..:.|::||..|. |.:||.:|||
Human    86 RESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKH-AGIMITIVWI 149

  Fly   202 TALSITCPPYLGWYEVGRHQAEFVDCRYNQNKGYVV---FSAMGSFFIPLTVMLYVYVKI---GY 260
            .::.|:.|| |.|    |||....|........::|   :|..|:|:|||.::|.:|.||   ..
Human   150 ISVFISMPP-LFW----RHQGTSRDDECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAK 209

  Fly   261 VLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFNSLHDPPPSAATN 325
            .|..:||       :.|.|..:|:|...:...|                                
Human   210 TLYHKRQ-------ASRIAKEEVNGQVLLESGE-------------------------------- 235

  Fly   326 AAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSAIS 390
                         |.:|..|                        |.|.|                
Human   236 -------------KSTKSVS------------------------TSYVL---------------- 247

  Fly   391 CKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQR 455
                                |.|.||.....:..::|.            ..|.:|.|.::..:|
Human   248 --------------------EKSLSDPSTDFDKIHSTV------------RSLRSEFKHEKSWRR 280

  Fly   456 SSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYLL 520
                                         .::|.| |:.|.|.||.:::|..:.|||||||..|:
Human   281 -----------------------------QKISGT-RERKAATTLGLILGAFVICWLPFFVKELV 315

  Fly   521 IPFLPRPAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRLT-CR 569
            :....:..:.|::.....|:|::|..|||.||..:|.||:.||.:|. ||
Human   316 VNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCR 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 79/198 (40%)
TM helix 1 78..101 CDD:410628 9/23 (39%)
TM helix 2 110..132 CDD:410628 10/21 (48%)
TM helix 3 148..170 CDD:410628 13/21 (62%)
TM helix 4 194..210 CDD:410628 6/15 (40%)
TM helix 5 233..256 CDD:410628 8/25 (32%)
7tm_GPCRs <491..563 CDD:475119 26/71 (37%)
TM helix 6 497..519 CDD:320098 11/21 (52%)
TM helix 7 531..556 CDD:320098 9/24 (38%)
HTR1FNP_000857.1 7tmA_5-HT1F 24..359 CDD:320456 128/494 (26%)
TM helix 1 25..51 CDD:320456 9/25 (36%)
TM helix 2 58..84 CDD:320456 12/25 (48%)
TM helix 3 96..126 CDD:320456 19/29 (66%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 120..122 1/1 (100%)
TM helix 4 138..160 CDD:320456 10/23 (43%)
TM helix 5 178..207 CDD:320456 11/28 (39%)
TM helix 6 286..316 CDD:320456 15/30 (50%)
TM helix 7 326..351 CDD:320456 9/24 (38%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 343..347 2/3 (67%)

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