DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and HTR1D

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_000855.1 Gene:HTR1D / 3352 HGNCID:5289 Length:377 Species:Homo sapiens


Alignment Length:523 Identity:154/523 - (29%)
Similarity:214/523 - (40%) Gaps:177/523 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GVP------SMNSYLVSMAW-PKSL-----AVAVFL-VIILVTVVGNTLVILAVLTTRRLRTVTN 110
            |:|      |:|:...|.|| |::|     ::||.| ||.|.||:.|..|:..:|.||:|.|..|
Human    10 GLPQEASNRSLNATETSEAWDPRTLQALKISLAVVLSVITLATVLSNAFVLTTILLTRKLHTPAN 74

  Fly   111 CFVMNLAITDWLVGTCVMPPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLA 175
            ..:.:||.||.||...|||.|:...||.||.||.||||||:|.||..|:.|||.||.|:||||.|
Human    75 YLIGSLATTDLLVSILVMPISIAYTITHTWNFGQILCDIWLSSDITCCTASILHLCVIALDRYWA 139

  Fly   176 VTQPLTYSKKRRSKRLALLMILVVWITALSITCPPYLGWYEVGRHQAEFVDCRYNQNK-GYVVFS 239
            :|..|.|| |||:...|..||.:||..::.|:.|| |.|.: .:.|.|..||..|.:: .|.::|
Human   140 ITDALEYS-KRRTAGHAATMIAIVWAISICISIPP-LFWRQ-AKAQEEMSDCLVNTSQISYTIYS 201

  Fly   240 AMGSFFIPLTVMLYVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLP 304
            ..|:|:||..:::.:|   |.:..:.|.||:.                                 
Human   202 TCGAFYIPSVLLIILY---GRIYRAARNRILN--------------------------------- 230

  Fly   305 NRKSRWRFNSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQP 369
                          |||.........|             ..||:||                  
Human   231 --------------PPSLYGKRFTTAH-------------LITGSAG------------------ 250

  Fly   370 TFYELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNT 434
                       |||  ||..|..:.|   ||     |..|:...|                  |.
Human   251 -----------SSL--CSLNSSLHEG---HS-----HSAGSPLFF------------------NH 276

  Fly   435 VALETNEKLEAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKT 499
            |.:    ||...|.:::                                  |:|.. |:.|..|.
Human   277 VKI----KLADSALERK----------------------------------RISAA-RERKATKI 302

  Fly   500 LTIVMGGLIACWLPFFVYYLLIPFLPRPAVLEDLMFG-FTWIGWVNCAINPFIYAFYNPDFRTAF 563
            |.|::|..|.|||||||..|::|.......:...:|. |||:|::|..|||.||..:|.:||.||
Human   303 LGIILGAFIICWLPFFVVSLVLPICRDSCWIHPALFDFFTWLGYLNSLINPIIYTVFNEEFRQAF 367

  Fly   564 WRL 566
            .::
Human   368 QKI 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 85/193 (44%)
TM helix 1 78..101 CDD:410628 10/23 (43%)
TM helix 2 110..132 CDD:410628 10/21 (48%)
TM helix 3 148..170 CDD:410628 13/21 (62%)
TM helix 4 194..210 CDD:410628 5/15 (33%)
TM helix 5 233..256 CDD:410628 6/23 (26%)
7tm_GPCRs <491..563 CDD:475119 30/72 (42%)
TM helix 6 497..519 CDD:320098 12/21 (57%)
TM helix 7 531..556 CDD:320098 11/25 (44%)
HTR1DNP_000855.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 4/12 (33%)
7tmA_5-HT1B_1D 35..367 CDD:320455 143/493 (29%)
TM helix 1 40..66 CDD:320455 11/25 (44%)
TM helix 2 73..99 CDD:320455 11/25 (44%)
TM helix 3 111..141 CDD:320455 19/29 (66%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 135..137 1/1 (100%)
TM helix 4 153..176 CDD:320455 9/23 (39%)
TM helix 5 194..223 CDD:320455 8/31 (26%)
TM helix 6 294..324 CDD:320455 15/30 (50%)
TM helix 7 335..360 CDD:320455 11/24 (46%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 352..356 2/3 (67%)

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