DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and Adra1d

DIOPT Version :9

Sequence 1:NP_001262682.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_077809.2 Gene:Adra1d / 29413 RGDID:62064 Length:562 Species:Rattus norvegicus


Alignment Length:552 Identity:139/552 - (25%)
Similarity:210/552 - (38%) Gaps:194/552 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 AAPGGDVMATGAG--------------AGKL-GVPSMNSYLVSMAWPKSLAVAVFL-VIILVTVV 90
            |..||.|:.||:|              :|:: |..::...:||   .:.:.|.||| ..||..|.
  Rat    45 ATGGGAVVGTGSGEDNQSSTGEPGAAASGEVNGSAAVGGLVVS---AQGVGVGVFLAAFILTAVA 106

  Fly    91 GNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYITGTWRFGWILCDIWISLDI 155
            ||.||||:|...|.|:||||.|::|||:.|.|:...|:|.|..:.:.|.|.||...||:|.::|:
  Rat   107 GNLLVILSVACNRHLQTVTNYFIVNLAVADLLLSAAVLPFSATMEVLGFWAFGRTFCDVWAAVDV 171

  Fly   156 LLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILVVWITALSITCPPYLGWYEVGRH 220
            |.|:.||||||.||:|||:.|...|.|......::.|.::.| :|..||.::..|.|||.|....
  Rat   172 LCCTASILSLCTISVDRYVGVRHSLKYPAIMTERKAAAILAL-LWAVALVVSVGPLLGWKEPVPP 235

  Fly   221 QAEFVDCRYNQNKGYVVFSAMGSFFIPLTVMLYVYVKIGYVLTSRRQRIVRDAYSERTADYDVDG 285
            ...|  |...:..||.:||::.||::|:.|::.:|.:: ||:                       
  Rat   236 DERF--CGITEEVGYAIFSSVCSFYLPMAVIVVMYCRV-YVV----------------------- 274

  Fly   286 DNFISESEHYHCTPTKWLPNRKSRWRFNSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTA 350
                                                                     ..|.|.:.
  Rat   275 ---------------------------------------------------------ARSTTRSL 282

  Fly   351 GAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFS 415
            .||           .|.:|.     :.|.:...|||..           :..|...|.||::|  
  Rat   283 EAG-----------IKREPG-----KASEVVLRIHCRG-----------AATSAKGYPGTQSS-- 318

  Fly   416 DTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHH 480
                                              |....|||                       
  Rat   319 ----------------------------------KGHTLRSS----------------------- 326

  Fly   481 HRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYLLIPFLPRPAVLEDLMFGFTWIGWVNC 545
              :.:|:....|:.|.||||.||:|..:.||.|||....|....|:....|.:.....|:|:.|.
  Rat   327 --LSVRLLKFSREKKAAKTLAIVVGVFVLCWFPFFFVLPLGSLFPQLKPSEGVFKVIFWLGYFNS 389

  Fly   546 AINPFIYAFYNPDFRTAFWR-LTCRPICKQKR 576
            .:||.||...:.:|:.||.| |.|:  |:::|
  Rat   390 CVNPLIYPCSSREFKRAFLRLLRCQ--CRRRR 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_001262682.1 7tm_4 82..>212 CDD:304433 56/130 (43%)
7tm_1 91..>277 CDD:278431 69/185 (37%)
Adra1dNP_077809.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 10..71 7/25 (28%)
7tm_GPCRs 91..407 CDD:421689 121/487 (25%)
TM helix 1 92..118 CDD:410628 14/25 (56%)
TM helix 2 125..151 CDD:410628 11/25 (44%)
TM helix 3 163..193 CDD:410628 17/29 (59%)
TM helix 4 205..228 CDD:410628 6/23 (26%)
TM helix 5 245..274 CDD:410628 10/29 (34%)
TM helix 6 335..365 CDD:410628 14/29 (48%)
TM helix 7 375..400 CDD:410628 8/24 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 452..481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 268 1.000 Inparanoid score I2951
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.960

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