DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrRII and drd3

DIOPT Version :9

Sequence 1:NP_001262682.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_005162730.1 Gene:drd3 / 282554 ZFINID:ZDB-GENE-021119-1 Length:472 Species:Danio rerio


Alignment Length:564 Identity:149/564 - (26%)
Similarity:235/564 - (41%) Gaps:162/564 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SAAPGGDVM-ATGAGAGKLGVPSMNSYLVSMAWPKSLAVAVFLVIILVTVVGNTLVILAVLTTRR 104
            |..|||:.. |:|....|     .|.|.:           ::.::||..|.||.||.:|||..|.
Zfish    35 SFTPGGNYSPASGVEEAK-----RNYYAM-----------LYSLLILAIVFGNVLVCIAVLRERA 83

  Fly   105 LRTVTNCFVMNLAITDWLVGTCVMPPSVVLYIT-GTWRFGWILCDIWISLDILLCSGSILSLCAI 168
            |:|.||..|::||:.|.||.:.|||.:|.|.:. |.|.|..:.|:::::||:::|:.|||:||||
Zfish    84 LQTTTNYLVVSLAVADLLVASLVMPWAVYLEVVGGAWLFSRLYCNVFVTLDVMMCTASILNLCAI 148

  Fly   169 SLDRYLAVTQPLTYSKKRRSKRLALLMILVVWITALSITCPPYLGWYEVGRHQAEFVDCRYNQNK 233
            |:|||.||..|:.|:....|::...:||..||:.|.:::||...|:....    :...|..: |.
Zfish   149 SIDRYTAVVMPVLYNTTHSSRKRVSVMIATVWVLAFAVSCPLLFGFNTTD----DPAVCSIS-NP 208

  Fly   234 GYVVFSAMGSFFIPLTVMLYVYVKIGYVLTSRRQRIV----------------------RDAYSE 276
            .:|::|::.||::|..|.|.|||:|...|..||::|.                      .||:.|
Zfish   209 DFVIYSSVVSFYLPFAVTLLVYVRIYIFLRRRRKKITFRQGSGKVQPASAPPSVEMCLQDDAHKE 273

  Fly   277 RTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFNSLHDPPPSAATNAAAKGHQSSVKCSKCS 341
            : .|......|.|:||:.....| :.|.|...|.|      |..:.|.|:               
Zfish   274 K-RDLSPIRINVITESKEQVIRP-RLLANCLRRKR------PQTAPAENS--------------- 315

  Fly   342 KCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMH 406
                            ::...:|                  |.:||.                  
Zfish   316 ----------------LLPPVIT------------------LNYCSI------------------ 328

  Fly   407 YVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQRS------SFDHHH--- 462
               ::|||:.|                  ..:.|.:.|....::|...||      :....|   
Zfish   329 ---SQASFART------------------EQDANREEEEGGDEEQVAVRSCEVKKLANGRTHTSL 372

  Fly   463 --PHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYLLIPFLP 525
              |.|.|......|:.....|         .::.|..:.|.||:|..:.|||||||.::|.....
Zfish   373 RPPRAAHAMVCPSQARCRSMH---------SKEKKATQMLAIVLGVFLICWLPFFVTHILNTHCR 428

  Fly   526 RPAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWR-LTC 568
            ...:..::...|||:|:||.|:||.||..:|.:||.||.: |:|
Zfish   429 ACHIPPEVYSAFTWLGYVNSALNPVIYTTFNIEFRRAFIKILSC 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_001262682.1 7tm_4 82..>212 CDD:304433 56/130 (43%)
7tm_1 91..>277 CDD:278431 73/208 (35%)
drd3XP_005162730.1 7tm_4 68..>243 CDD:304433 71/179 (40%)
7tm_1 70..455 CDD:278431 128/494 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D189663at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.