DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and ser-6

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_741350.1 Gene:ser-6 / 259560 WormBaseID:WBGene00021897 Length:401 Species:Caenorhabditis elegans


Alignment Length:515 Identity:126/515 - (24%)
Similarity:199/515 - (38%) Gaps:161/515 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYITGTWRFGWILC 147
            |:....|:||.||...:||.:.|:|.||..|::|.|:|.|:|..::|.:::...:..|.||...|
 Worm    10 VVNCFVVIGNLLVFYVILTKKSLQTSTNHLVLSLTISDLLLGILILPFAIIQEHSNEWIFGHFGC 74

  Fly   148 DIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILVVWITALSITCPPYL 212
            .:|:|:|:.|.:.||.:|.|||.|||:||.||:.| ....|.::..||..:||..:|.:....::
 Worm    75 RLWLSVDVFLSTASIYNLLAISFDRYMAVRQPIKY-PIISSTKVVRLMTFLVWFCSLLLAVILFV 138

  Fly   213 GWYEVGRHQAE-FVDCRYNQNKG-YVVFSAMGSFFIPLTVMLYVYVKI----------------- 258
             ...:..|.:| ..||:...... |::||||.||.:|..||:.:.|:|                 
 Worm   139 -LLTLNAHDSEPTKDCQPTSLPSMYIIFSAMASFIVPAFVMVILNVRIFQTVLHTSRTMTVKSKN 202

  Fly   259 GYVLTSRRQRIV-----RDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFNSLHDP 318
            |.:...||:..:     .|.|..|           :|..|....:|:|            .:.||
 Worm   203 GSLRVHRRKEPIIPVKKHDKYETR-----------LSHEEECVGSPSK------------EVIDP 244

  Fly   319 PPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSL 383
            .|..|  ...|.|:||.                                       |:...:.|.
 Worm   245 IPVVA--VVEKHHKSSA---------------------------------------VDAPAIRSF 268

  Fly   384 IHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAK 448
            :             .|:...|:    .||..:      |:.|:.|                    
 Worm   269 L-------------THTVVFGV----LEAKKT------NIINHIT-------------------- 290

  Fly   449 QKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLP 513
              |..:||:....:|..               .:..||.| .:.:.:.|:|..||:...|.||:|
 Worm   291 --QWWRRSTVRSPNPST---------------RKKCMRRS-LRTEIRVARTTGIVVAAFIVCWIP 337

  Fly   514 FFVYYLLIPFLP-------RPAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRL 566
            |...|:|..:..       .||.|....|   |:|:.|.|:||.:||.::.|||.|..||
 Worm   338 FTTIYVLQAYAVCTVAAGCIPASLFTTAF---WLGYSNSAVNPILYAAFSRDFRIALKRL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 66/205 (32%)
TM helix 1 78..101 CDD:410628 6/17 (35%)
TM helix 2 110..132 CDD:410628 8/21 (38%)
TM helix 3 148..170 CDD:410628 9/21 (43%)
TM helix 4 194..210 CDD:410628 5/15 (33%)
TM helix 5 233..256 CDD:410628 10/23 (43%)
7tm_GPCRs <491..563 CDD:475119 26/78 (33%)
TM helix 6 497..519 CDD:320098 9/21 (43%)
TM helix 7 531..556 CDD:320098 9/24 (38%)
ser-6NP_741350.1 7tmA_amine_R-like 3..391 CDD:320098 123/510 (24%)
TM helix 1 3..29 CDD:320098 7/18 (39%)
TM helix 2 36..63 CDD:320098 9/26 (35%)
TM helix 3 74..104 CDD:320098 15/29 (52%)
TM helix 4 116..136 CDD:320098 5/19 (26%)
TM helix 5 158..314 CDD:320098 46/280 (16%)
TM helix 6 315..345 CDD:320098 10/29 (34%)
TM helix 7 359..384 CDD:320098 11/27 (41%)

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