DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and Chrm2

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_987076.2 Gene:Chrm2 / 243764 MGIID:88397 Length:466 Species:Mus musculus


Alignment Length:544 Identity:128/544 - (23%)
Similarity:213/544 - (39%) Gaps:120/544 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SMNSYLVSMAWPKSLAVAVFLVII-----LVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDW 121
            |.|:.|...:..|:..| ||:|::     |||::||.||::::...|.|:||.|.|:.:||..|.
Mouse     7 SSNNGLAITSPYKTFEV-VFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADL 70

  Fly   122 LVGTCVMPPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKR 186
            ::|...|....:..:.|.|..|.::||:|::||.::.:.|:::|..||.|||..||:||||..||
Mouse    71 IIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKR 135

  Fly   187 RSKRLALLMILVVWITALSITCPPYLGW-YEVGRHQAEFVDC--RYNQNKGYVVFSAMGSFFIPL 248
            .:| :|.:||...|:.:..:..|..|.| :.||....|..:|  ::..|......:|:.:|::|:
Mouse   136 TTK-MAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAVTFGTAIAAFYLPV 199

  Fly   249 TVMLYVYVKIGYVLTSRRQRIVRDAYSERTADYD------VDGDNFISESEHYHCTPTKWLPNRK 307
            .:|..:|..|.....||    ::....|..|:.|      |.| ..:..:.:.       :|...
Mouse   200 IIMTVLYWHISRASKSR----IKKEKKEPVANQDPVSPSLVQG-RIVKPNNNN-------MPGGD 252

  Fly   308 SRWRFNSLHD--PPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPT 370
            .....|.:.:  .|....|....:|.:         |.||...|:.:...:.:.|..:|...   
Mouse   253 GGLEHNKIQNGKAPRDGGTENCVQGEE---------KESSNDSTSVSAVASNMRDDEITQDE--- 305

  Fly   371 FYELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHY----VGTEASFSDTCLGGNVSNNTTTTT 431
                            :.:|...|    ||.......    :.|:....|.|          |.|
Mouse   306 ----------------NTVSTSLG----HSKDDNSRQTCIKIVTKTQKGDAC----------TPT 340

  Fly   432 TNTVALETNEKLEAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTK----- 491
            :.||.|.                              ||.||......:......|..||     
Mouse   341 STTVELV------------------------------GSSGQNGDEKQNIVARKIVKMTKQPAKK 375

  Fly   492 -----RDSKTAKTLTIVMGGLIACWLPFFVYYLLIPFLPRPAVLEDLMFGFTWIGWVNCAINPFI 551
                 |:.|..:|:..::...|..|.|:.|..|:..|. .|.:...:.....|:.::|..|||..
Mouse   376 KPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFC-APCIPNTVWTIGYWLCYINSTINPAC 439

  Fly   552 YAFYNPDFRTAFWRLTCRPICKQK 575
            ||..|..|:..|..|.   :|..|
Mouse   440 YALCNATFKKTFKHLL---MCHYK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 66/199 (33%)
TM helix 1 78..101 CDD:410628 11/27 (41%)
TM helix 2 110..132 CDD:410628 7/21 (33%)
TM helix 3 148..170 CDD:410628 7/21 (33%)
TM helix 4 194..210 CDD:410628 3/15 (20%)
TM helix 5 233..256 CDD:410628 4/22 (18%)
7tm_GPCRs <491..563 CDD:475119 20/81 (25%)
TM helix 6 497..519 CDD:320098 5/21 (24%)
TM helix 7 531..556 CDD:320098 7/24 (29%)
Chrm2NP_987076.2 7tmA_mAChR_M2 24..451 CDD:320424 119/512 (23%)
TM helix 1 25..51 CDD:320424 9/25 (36%)
TM helix 2 58..84 CDD:320424 7/25 (28%)
TM helix 3 96..126 CDD:320424 12/29 (41%)
Important for signaling 120..122 1/1 (100%)
TM helix 4 138..161 CDD:320424 6/23 (26%)
TM helix 5 183..212 CDD:320424 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..320 20/141 (14%)
TM helix 6 380..410 CDD:320424 8/29 (28%)
TM helix 7 419..444 CDD:320424 7/24 (29%)
Important for signaling 436..440 2/3 (67%)

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