DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrRII and tyra-3

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001024805.1 Gene:tyra-3 / 187427 WormBaseID:WBGene00006475 Length:592 Species:Caenorhabditis elegans


Alignment Length:613 Identity:164/613 - (26%)
Similarity:257/613 - (41%) Gaps:157/613 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LLIQTSAAPGGDVMAT-GAGAGKLGVPS-----MNSYLVSMAWPKS------------------- 75
            :.|...||.||.:..: ....|.:.:||     :.|..|:..|..|                   
 Worm    24 VFIYIQAALGGSLWTSISTPEGSVSLPSSTTATITSTTVTPVWVASKNSIPFADTLGSNSPLSEY 88

  Fly    76 -----------LAVAVFLV-IILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVM 128
                       :.:|:||| :||:|:.||.||:|:|:..:|:||.||..:.:||..|.|||..||
 Worm    89 LPVKLCLGIHDVFIALFLVMLILLTIFGNILVVLSVVVYKRMRTFTNILLTSLATADLLVGLIVM 153

  Fly   129 PPSVV-LYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLA 192
            |.|:: |.....|..|..||.:|.:.|:|||:.|||:||.||||||.|:|.||.| .:.||:::|
 Worm   154 PMSLLDLLHNHRWPLGRFLCRMWATSDVLLCTASILNLCVISLDRYFAITSPLKY-PRTRSRKMA 217

  Fly   193 LLMILVVWITALSITCPPYL--GW-------YEVGRHQAEFVDCRYNQNKGYVVFSAMGSFFIPL 248
            ..::..||..:..:..||::  .|       ...|  .:|...|.|:.:..|.::||:|||::||
 Worm   218 AGLLTAVWAISFVVCSPPWVIPSWNLFIDNNNNTG--SSEDFKCAYSPSVAYRIYSALGSFYLPL 280

  Fly   249 TVMLYVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFN 313
            .|||:||.|| :.:.|.|:.::|.:...                    |..:..|...:.:.:.|
 Worm   281 LVMLFVYFKI-FRVASEREALMRQSVGT--------------------CRLSNRLTKTQQKNQRN 324

  Fly   314 SLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVS 378
            :|.        .|:|...::.|:.:  ..|.....:......|..|:.:|...|:          
 Worm   325 NLR--------TASAPHSRTRVQVN--HNCGRVNYSVRPVEYANRVENSLKPSHE---------- 369

  Fly   379 RLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKL 443
            |..|.            .|..|.|:|           |:...|...|.:.:..||:    ....|
 Worm   370 RFDST------------DCEDSPPNG-----------DSLEAGTTCNISMSLVTNS----PPNGL 407

  Fly   444 EAEAKQKQQQQRSSFDH-------------------------HHPHAHHHGSHGQQSHHNHHH-- 481
            :.|||...:::..|...                         ...:|....::..|..|.|:.  
 Worm   408 QKEAKNSMERECHSLADIVNSADTPVRKNTEVGVAPSLSKRARQCNARLQPNNLLQKAHEHYQIN 472

  Fly   482 --RMPMRVSTTK----RDSKTAKTLTIVMGGLIACWLPFFVYYLLIPFLPRPAVLEDLMFG---- 536
              ...:|.|..|    |:.|..||:.||:.|.|.||:|||:.||:..|:..| |.|..::.    
 Worm   473 GPGKAVRGSKEKMVYMRERKALKTIGIVVLGFIICWMPFFIMYLVEVFISDP-VAESPIYRITSE 536

  Fly   537 -FTWIGWVNCAINPFIYAFYNPDFRTAF 563
             |.|:|:.|..:||.||..||.|||..|
 Worm   537 FFLWLGYSNSVLNPIIYTMYNGDFRRCF 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 83/202 (41%)
TM helix 1 78..101 CDD:410628 13/23 (57%)
TM helix 2 110..132 CDD:410628 10/21 (48%)
TM helix 3 148..170 CDD:410628 11/21 (52%)
TM helix 4 194..210 CDD:410628 2/15 (13%)
TM helix 5 233..256 CDD:410628 12/22 (55%)
7tm_GPCRs <491..563 CDD:475119 33/80 (41%)
TM helix 6 497..519 CDD:320098 11/21 (52%)
TM helix 7 531..556 CDD:320098 9/29 (31%)
tyra-3NP_001024805.1 7tmA_tyramine_R-like 101..>300 CDD:320189 83/202 (41%)
TM helix 1 101..127 CDD:320189 13/25 (52%)
TM helix 2 134..160 CDD:320189 12/25 (48%)
TM helix 3 173..203 CDD:320189 18/29 (62%)
TM helix 4 215..238 CDD:320189 5/22 (23%)
TM helix 5 264..289 CDD:320189 13/24 (54%)
7tm_GPCRs <486..564 CDD:475119 32/78 (41%)
TM helix 6 494..516 CDD:320189 11/21 (52%)
TM helix 7 532..557 CDD:320189 8/24 (33%)

Return to query results.
Submit another query.