DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and octr-1

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001024569.1 Gene:octr-1 / 184469 WormBaseID:WBGene00006411 Length:408 Species:Caenorhabditis elegans


Alignment Length:524 Identity:133/524 - (25%)
Similarity:210/524 - (40%) Gaps:179/524 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LAVAVFLVIILVTVVGNTLVILAVLTTRRLRTV-TNCFVMNLAITDWLVGTCVMPPSVVLYITGT 139
            |.::..|.::|:.:.||.||::.|...|:||.. .|..:::||:.|.|||..|||.::...|.|.
 Worm    23 LTISSMLTVMLLIIFGNLLVVVTVYRDRKLRMQRQNWLIVSLAVADMLVGLLVMPLTLTYEIVGE 87

  Fly   140 WRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILVVWITAL 204
            |..|.|||:||::||:|..:.|||.:||||||||.:||.||||...|...|: .:.|.|.||.:|
 Worm    88 WTMGNILCEIWLALDVLFVTASILHICAISLDRYFSVTSPLTYPATRTPLRM-FIYIGVSWIVSL 151

  Fly   205 SITCPPYLGWYEVGRHQAEFVDCRYNQNKGYVVFSAMGSFFIPLTVMLYVYVKIGYVLTSR--RQ 267
            .|..||..||    |.:....:|..:.:.|||::|::|||:||:.:::.||.|| |.:|.|  ||
 Worm   152 LICLPPIFGW----RPERAEGECSVSTDLGYVLYSSLGSFYIPVVILIIVYAKI-YSITIRHSRQ 211

  Fly   268 RI--------------VRDAYSER-TADYDVDGDNFISESEHYHCTPTKWLPNR----KSRWRFN 313
            |:              :|.:.:|| ..:|:::.::...|.|     ..|.:.||    |..|:..
 Worm   212 RLKETERRDHTLNMLTIRSSTNERYNMEYELEENSDPIEDE-----KEKVVTNRDMINKVCWQLR 271

  Fly   314 SLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVS 378
            .:.:..|           :..||.|                                        
 Worm   272 KISEELP-----------RQGVKVS---------------------------------------- 285

  Fly   379 RLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKL 443
                                                                    :||:||   
 Worm   286 --------------------------------------------------------IALDTN--- 291

  Fly   444 EAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLI 508
                            |:.|.|.......::.......:..::.    ::.:....|.|::...|
 Worm   292 ----------------HNSPPASDLTRKLEEKKFCEKRKRKLKA----KERQATLLLGIILSAFI 336

  Fly   509 ACWLPFFVYYLLIPF---LPRPAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRLTCRP 570
            ..|||||:.|::..|   .| |.|.:    .|.|:|:.|..|||.||..:|.:|:        |.
 Worm   337 LSWLPFFLIYVIGAFGHEAP-PLVFK----FFFWLGYCNSGINPVIYTVFNREFK--------RG 388

  Fly   571 ICKQ 574
            :|||
 Worm   389 LCKQ 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 82/208 (39%)
TM helix 1 78..101 CDD:410628 7/22 (32%)
TM helix 2 110..132 CDD:410628 10/21 (48%)
TM helix 3 148..170 CDD:410628 11/21 (52%)
TM helix 4 194..210 CDD:410628 6/15 (40%)
TM helix 5 233..256 CDD:410628 10/22 (45%)
7tm_GPCRs <491..563 CDD:475119 24/74 (32%)
TM helix 6 497..519 CDD:320098 8/21 (38%)
TM helix 7 531..556 CDD:320098 9/24 (38%)
octr-1NP_001024569.1 7tmA_alpha2_AR 22..389 CDD:320187 130/519 (25%)
TM helix 1 23..49 CDD:320187 8/25 (32%)
TM helix 2 57..83 CDD:320187 10/25 (40%)
TM helix 3 95..125 CDD:320187 17/29 (59%)
TM helix 4 137..160 CDD:320187 9/23 (39%)
TM helix 5 175..204 CDD:320187 14/29 (48%)
TM helix 6 319..349 CDD:320187 9/33 (27%)
TM helix 7 357..382 CDD:320187 11/28 (39%)

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