DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and dop-1

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001370620.1 Gene:dop-1 / 180714 WormBaseID:WBGene00001052 Length:460 Species:Caenorhabditis elegans


Alignment Length:525 Identity:137/525 - (26%)
Similarity:210/525 - (40%) Gaps:156/525 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 MAWPKSLAVAVFLVIILVTVVGNTLVILAVLTTRRLR-TVTNCFVMNLAITDWLVGTCVMPPSVV 133
            :.||   .:.:|.|:|::.:.||.||..|:|..|.|| ...|.|:::||::|.||...||..:.|
 Worm     4 LQWP---LLGLFSVLIILALFGNLLVCAAILWDRSLRKQPENLFLVSLAVSDLLVSVLVMLFAAV 65

  Fly   134 LYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILV 198
            ..|.|.|.||...|..|||.||..|:.|||:|||||||||..:::|:.|.:....:|:..:::| 
 Worm    66 NDILGYWPFGQFYCQFWISFDITTCTASILNLCAISLDRYWHISRPMVYIRYCNRRRINYVIVL- 129

  Fly   199 VWITALSITCPPYLGWYEVGRHQAEFVD-------CRYNQNKGYVVFSAMGSFFIPLTVMLYVYV 256
            ||:.:..|...| ||:   |......::       |.......|.:.|:|.|||:|..||:.:|.
 Worm   130 VWLISAGIGAAP-LGF---GFGSKVTINNLTGLPVCEMRLPLPYAIGSSMVSFFLPAMVMVILYT 190

  Fly   257 KIGYVLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFNSLHDPPPS 321
            |: |:...:..|.::....:.|        :|:          ...|.:.|.|            
 Worm   191 KL-YLYARKHVRSIKTQLQQAT--------SFL----------IMQLASEKIR------------ 224

  Fly   322 AATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHC 386
            ..|.|..||.......|..::.::.|                             |||       
 Worm   225 EVTAATLKGEALLPPDSPATERTTMT-----------------------------VSR------- 253

  Fly   387 SAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQ 451
                               ||                |..:|||||.......::|..::.|.:.
 Worm   254 -------------------HY----------------SRRSTTTTTTATPRRGDKKTSSQNKVES 283

  Fly   452 -----------------QQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKT 499
                             :.|||..|.|.|.||:..:                :|    |.|...|
 Worm   284 IRTSIFSKLNFLCPTRFKNQRSPQDPHTPAAHNRSN----------------IS----DQKARLT 328

  Fly   500 LTIVMGGLIACWLPFFVYYLLIPFLPRPAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFW 564
            |.::||..:.||||||...:|..:||.....:.:| ..||:|:.|.:.||.||:.:|.|||.||.
 Worm   329 LGVIMGTFLVCWLPFFTVNILRAWLPEIFSSKTIM-AVTWLGYANSSANPLIYSIFNRDFRRAFK 392

  Fly   565 RLTCR 569
            ::..|
 Worm   393 KIIVR 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 71/199 (36%)
TM helix 1 78..101 CDD:410628 8/22 (36%)
TM helix 2 110..132 CDD:410628 9/21 (43%)
TM helix 3 148..170 CDD:410628 13/21 (62%)
TM helix 4 194..210 CDD:410628 4/15 (27%)
TM helix 5 233..256 CDD:410628 9/22 (41%)
7tm_GPCRs <491..563 CDD:475119 28/71 (39%)
TM helix 6 497..519 CDD:320098 10/21 (48%)
TM helix 7 531..556 CDD:320098 9/24 (38%)
dop-1NP_001370620.1 7tmA_Ap5-HTB1-like 7..391 CDD:320193 133/514 (26%)
TM helix 1 7..33 CDD:320193 10/28 (36%)
TM helix 2 41..67 CDD:320193 10/25 (40%)
TM helix 3 79..109 CDD:320193 19/29 (66%)
TM helix 4 121..143 CDD:320193 6/23 (26%)
TM helix 5 166..195 CDD:320193 12/29 (41%)
TM helix 6 320..350 CDD:320193 13/33 (39%)
TM helix 7 359..384 CDD:320193 9/25 (36%)

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