DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrRII and Hrh2

DIOPT Version :9

Sequence 1:NP_001262682.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_036013748.1 Gene:Hrh2 / 15466 MGIID:108482 Length:421 Species:Mus musculus


Alignment Length:522 Identity:114/522 - (21%)
Similarity:175/522 - (33%) Gaps:219/522 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LVSMAWPKSLAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPS 131
            |.|:|...:::| |...:|.:||.||.:|.|||...||||::||||:::||.||.|:|..|||.|
Mouse    12 LDSIALKVTISV-VLTTLIFITVAGNVVVCLAVSLNRRLRSLTNCFIVSLAATDLLLGLLVMPFS 75

  Fly   132 VVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMI 196
            .:..::..|.||.:.|:|:.|||::||:.|||:|..||||||.|||.||.|.......|:|:.::
Mouse    76 AIYQLSFKWSFGQVFCNIYTSLDVMLCTASILNLFMISLDRYCAVTDPLRYPVLVTPVRVAISLV 140

  Fly   197 LVVWITALSIT-CPPYLGWYEVG--RHQAEFVDCRYNQNKGYVVFSAMGSFFIPLTVMLYVYVKI 258
            . :|:.::::: ...:|||....  |...:...|:...|:.|.:...|.:|::||.:|...|.:|
Mouse   141 F-IWVISITLSFLSIHLGWNSRNGTRGGNDTFKCKVQVNEVYGLVDGMVTFYLPLLIMCVTYYRI 204

  Fly   259 GYVLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFNSLHDPPPSAA 323
            ..:...:.:||                                   |..|.|:            
Mouse   205 FKIAREQAKRI-----------------------------------NHISSWK------------ 222

  Fly   324 TNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSA 388
                                                                             
Mouse   223 ----------------------------------------------------------------- 222

  Fly   389 ISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQ 453
                                                                             
Mouse   223 ----------------------------------------------------------------- 222

  Fly   454 QRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYY 518
                                              :.|.|:.|...||..|||..|.||.|:|..:
Mouse   223 ----------------------------------AATIREHKATVTLAAVMGAFIVCWFPYFTAF 253

  Fly   519 LLIPFLPRPAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRLTCRPICKQKRPPNHLAM 583
            :........||.|.:.....|:|:.|.|:||.:||..|.|||.|:.:|.   .||.....:|...
Mouse   254 VYRGLRGDDAVNEVVEGIVLWLGYANSALNPILYATLNRDFRMAYQQLF---HCKLASHNSHKTS 315

  Fly   584 FR 585
            .|
Mouse   316 LR 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_001262682.1 7tm_4 82..>212 CDD:304433 56/130 (43%)
7tm_1 91..>277 CDD:278431 69/188 (37%)
Hrh2XP_036013748.1 7tmA_Histamine_H2R 19..298 CDD:320179 105/491 (21%)
TM helix 1 21..45 CDD:320179 11/24 (46%)
TM helix 2 54..76 CDD:320179 12/21 (57%)
TM helix 3 92..114 CDD:320179 11/21 (52%)
TM helix 4 137..153 CDD:320179 1/16 (6%)
TM helix 5 179..202 CDD:320179 6/22 (27%)
TM helix 6 232..254 CDD:320179 10/21 (48%)
TM helix 7 266..291 CDD:320179 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

Return to query results.
Submit another query.