DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and Chrm3

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_150372.1 Gene:Chrm3 / 12671 MGIID:88398 Length:589 Species:Mus musculus


Alignment Length:642 Identity:153/642 - (23%)
Similarity:250/642 - (38%) Gaps:173/642 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DAMLP---YSKLLSTALTVASGNSNSSDGTLLLIQTSAAP-GGDVMATGAGAGKLGVPSMNSYLV 68
            :|.||   .|:|.|..::..|||.:|:|       ||:.| ||..:                   
Mouse    26 EAGLPLGTVSQLDSYNISQTSGNFSSND-------TSSDPLGGHTI------------------- 64

  Fly    69 SMAWPKSLAVAVFLV--IILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPS 131
               |  .:....||.  :.|||::||.|||:|....::|:||.|.|:::||..|.::|...|...
Mouse    65 ---W--QVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLF 124

  Fly   132 VVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMI 196
            ....|...|..|.:.||:|:|:|.:..:.|:::|..||.|||.::|:||||..||.:|| |.:||
Mouse   125 TTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKR-AGVMI 188

  Fly   197 LVVWITALSITCPPYLGW-YEVGRHQAEFVDCRYNQNKGYVVF---------SAMGSFFIPLTVM 251
            .:.|:.:..:..|..|.| |.||:......:|       ::.|         :|:.:|::|:|:|
Mouse   189 GLAWVISFVLWAPAILFWQYFVGKRTVPPGEC-------FIQFLSEPTITFGTAIAAFYMPVTIM 246

  Fly   252 LYVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFI---------SESE-------------- 293
            ..:|.:| |..|.:|.:.:....:..|   :.:.:||:         |..|              
Mouse   247 TILYWRI-YKETEKRTKELAGLQASGT---EAEAENFVHPTGSSRSCSSYELQQQGTKRSSRRKY 307

  Fly   294 ---HYHCTPTKWLPNRK---------SRWRFNSLHDPPPSAATNAAA------------------ 328
               |:..|...|.|:.:         ..|..|   |...|...:|::                  
Mouse   308 GGCHFWFTTKSWKPSAEQMDQDHSSSDSWNNN---DAAASLENSASSDEEDIGSETRAIYSIVLK 369

  Fly   329 -KGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTL-TFKHQPTFYELVEVSRLSSLIHCSAISC 391
             .||.:.:..:|.....:..          |.||.| |...:...::|.....:....:|.....
Mouse   370 LPGHSTILNSTKLPSSDNLQ----------VPDKDLGTMDVERNAHKLQAQKSMDDRDNCQKDFS 424

  Fly   392 KYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQRS 456
            |        .|..:......|..|||        |::...| |.||..:.|....||:...:.||
Mouse   425 K--------LPIQLESAVDTAKTSDT--------NSSVDKT-TAALPLSFKEATLAKRFALKTRS 472

  Fly   457 SFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYLLI 521
            .....                       .|:|..| :.|.|:||:.::...|..|.|:.:..|:.
Mouse   473 QITKR-----------------------KRMSLIK-EKKAAQTLSAILLAFIITWTPYNIMVLVN 513

  Fly   522 PFLPR--PAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRLTCRPICKQKR 576
            .|...  |....:|.:   |:.::|..:||..||..|..|||.|..|......|:||
Mouse   514 TFCDSCIPKTYWNLGY---WLCYINSTVNPVCYALCNKTFRTTFKMLLLCQCDKRKR 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 67/203 (33%)
TM helix 1 78..101 CDD:410628 11/24 (46%)
TM helix 2 110..132 CDD:410628 7/21 (33%)
TM helix 3 148..170 CDD:410628 7/21 (33%)
TM helix 4 194..210 CDD:410628 3/15 (20%)
TM helix 5 233..256 CDD:410628 6/31 (19%)
7tm_GPCRs <491..563 CDD:475119 22/73 (30%)
TM helix 6 497..519 CDD:320098 6/21 (29%)
TM helix 7 531..556 CDD:320098 7/24 (29%)
Chrm3NP_150372.1 7tmA_mAChR_M3 65..>269 CDD:320426 68/214 (32%)
TM helix 1 69..95 CDD:320426 11/25 (44%)
TM helix 2 102..129 CDD:320426 7/26 (27%)
TM helix 3 140..170 CDD:320426 12/29 (41%)
TM helix 4 182..205 CDD:320426 7/23 (30%)
TM helix 5 227..256 CDD:320426 8/29 (28%)
Basolateral sorting signal. /evidence=ECO:0000250 274..280 1/5 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..295 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..356 5/35 (14%)
7tm_GPCRs <483..563 CDD:475119 24/83 (29%)
TM helix 6 489..511 CDD:410628 6/21 (29%)
TM helix 7 522..547 CDD:410628 7/27 (26%)

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