DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and LOC116411706

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_031760361.1 Gene:LOC116411706 / 116411706 XenbaseID:XB-GENE-29097575 Length:402 Species:Xenopus tropicalis


Alignment Length:583 Identity:136/583 - (23%)
Similarity:207/583 - (35%) Gaps:195/583 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MLPYSKLLSTALTVA-SGNSNSSDGTLLLIQTSAAPGGDVMATGAGAGKLGVPSMNSYLVSMAWP 73
            |..|:..::..|..: |||..:.:.|    .||..   |||.|            .|..::|.  
 Frog     1 MFHYTVQVNMKLVFSLSGNVTNINQT----NTSLV---DVMGT------------QSPQITMI-- 44

  Fly    74 KSLAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYITG 138
              :.|.|...:|||||:||||||||.:..||||..:|.|::||||.|:.:|...:|..|....||
 Frog    45 --ILVTVISCLILVTVLGNTLVILAFIEDRRLRNRSNFFLLNLAICDFFIGAFCIPFYVPYVFTG 107

  Fly   139 TWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILVVWITA 203
            .|..|..||.:|:.:|.|:|:.|..::..||.||:|:||..:.:....:.....:|.:.:|||.|
 Frog   108 KWLLGKFLCKLWLIVDNLMCTASAFNVVLISYDRFLSVTMAVLHRSIEKEHGRTVLNMALVWILA 172

  Fly   204 LSITCPPYLGWYEVGRHQAEFVDCRYNQNKGYVVFSAMGSFFIPLTVMLYVYVKIGYVLTSRRQR 268
            ..:..|..:.|                                                      
 Frog   173 SLLYSPAIIFW------------------------------------------------------ 183

  Fly   269 IVRDAYSERTADYDVDGDNFISESEHYHCTPTK-WLPNRKSRWRFNSLHDPPPSAATNAAAKGHQ 332
                       :| ||||..|         ||. .||.....|.|.                   
 Frog   184 -----------EY-VDGDKSI---------PTDLCLPGYFYAWYFL------------------- 208

  Fly   333 SSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSAISCKYGGPC 397
                                 .||...|..|         .|:.:|..:..::|:..|.......
 Frog   209 ---------------------LGASTFDFLL---------PLLSISFFNLSLYCNIRSRSRKKQH 243

  Fly   398 MHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQRS---SFD 459
            :.::|...:..|..|  ....:.||..:|......||             .|.::.:||   .|.
 Frog   244 IVTSPIDSNLDGNPA--RPYIISGNDFHNGAVKDLNT-------------PQYKKGKRSLCCFFS 293

  Fly   460 HHHP-HAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYLLIPF 523
            :..| |...     |...:|.|      |....||.|.||:|::::.....||.|   |.||:..
 Frog   294 NVLPLHRDQ-----QTVRYNVH------VIKLSRDKKIAKSLSVLVCVFGMCWAP---YSLLMTI 344

  Fly   524 LPRPAVLE--------DLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRLTCRPICKQKRPP 578
              |.|..:        |:.|   |:.|:|.::|||:|...:..||.||.::..:.|..:...|
 Frog   345 --RAACHDNCIDSYWYDITF---WLLWINSSVNPFLYPLCHESFRKAFAKVFYKYIKNKNLKP 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 54/191 (28%)
TM helix 1 78..101 CDD:410628 15/22 (68%)
TM helix 2 110..132 CDD:410628 9/21 (43%)
TM helix 3 148..170 CDD:410628 6/21 (29%)
TM helix 4 194..210 CDD:410628 5/15 (33%)
TM helix 5 233..256 CDD:410628 0/22 (0%)
7tm_GPCRs <491..563 CDD:475119 25/79 (32%)
TM helix 6 497..519 CDD:320098 7/21 (33%)
TM helix 7 531..556 CDD:320098 9/32 (28%)
LOC116411706XP_031760361.1 7tmA_Histamine_H3R_H4R 44..387 CDD:320176 117/504 (23%)
TM helix 1 45..71 CDD:320176 15/25 (60%)
TM helix 2 78..105 CDD:320176 10/26 (38%)
TM helix 3 116..146 CDD:320176 11/29 (38%)
TM helix 4 161..179 CDD:320176 5/17 (29%)
TM helix 5 204..234 CDD:320176 9/78 (12%)
TM helix 6 315..345 CDD:320176 12/34 (35%)
TM helix 7 355..380 CDD:320176 9/27 (33%)

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