DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and Adra1a

DIOPT Version :9

Sequence 1:NP_001262682.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001258689.1 Gene:Adra1a / 11549 MGIID:104773 Length:466 Species:Mus musculus


Alignment Length:539 Identity:134/539 - (24%)
Similarity:205/539 - (38%) Gaps:214/539 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 KSLAVAVFL-VIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYIT 137
            |::.:.|.| .:|:..|:||.||||:|...|.|.:||:.:::|||:.|.|:.:.|:|.|.:..|.
Mouse    25 KAILLGVILGGLIIFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTSTVLPFSAIFEIL 89

  Fly   138 GTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYS---KKRRSKRLALLMILVV 199
            |.|.||.:.|:||.::|:|.|:.||:.||.||:|||:.|:.||.|.   .:||..|    .:|.|
Mouse    90 GYWAFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGVR----ALLCV 150

  Fly   200 WITALSITCPPYLGWYEVGRHQA--EFVDCRYNQNKGYVVFSAMGSFFIPLTVMLYVYVKIGYVL 262
            |..:|.|:..|..||    |.||  :...|:.|:..|||:|||:|||::|||::|.:|.:: ||:
Mouse   151 WALSLVISIGPLFGW----RQQAPEDETICQINEEPGYVLFSALGSFYVPLTIILVMYCRV-YVV 210

  Fly   263 TSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFNSLHDPPPSAATNAA 327
            ..|..|                                                           
Mouse   211 AKRESR----------------------------------------------------------- 216

  Fly   328 AKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSAISCK 392
              |.:|.:|..|                                                     
Mouse   217 --GLKSGLKTDK----------------------------------------------------- 226

  Fly   393 YGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQRSS 457
                                  ||:                                    ::.:
Mouse   227 ----------------------SDS------------------------------------EQVT 233

  Fly   458 FDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYLLIP 522
            ...|..:....|| |..|..|..| ..:|:....|:.|.||||.||:|..:.||||||:...:..
Mouse   234 LRIHRKNVPAEGS-GVSSAKNKTH-FSVRLLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGS 296

  Fly   523 FLPR---PAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRLTCRPICKQKR-------- 576
            |.|.   |..:..::|   |:|::|..|||.||...:.:|:.||..: .|..|.::|        
Mouse   297 FFPNFKPPETVFKIVF---WLGYLNSCINPIIYPCSSQEFKKAFQNV-LRIQCLRRRQSSKHALG 357

  Fly   577 ----PPN------HLAMFR 585
                ||:      |..|.|
Mouse   358 YTLHPPSQAVEGQHRGMVR 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_001262682.1 7tm_4 82..>212 CDD:304433 55/133 (41%)
7tm_1 91..>277 CDD:278431 77/190 (41%)
Adra1aNP_001258689.1 7tmA_alpha1A_AR 27..337 CDD:320448 123/495 (25%)
TM helix 1 29..53 CDD:320448 11/23 (48%)
TM helix 2 62..84 CDD:320448 7/21 (33%)
TM helix 3 100..122 CDD:320448 10/21 (48%)
TM helix 4 145..161 CDD:320448 6/19 (32%)
TM helix 5 182..205 CDD:320448 13/22 (59%)
TM helix 6 271..293 CDD:320448 13/21 (62%)
TM helix 7 305..330 CDD:320448 9/27 (33%)
Nuclear localization signal. /evidence=ECO:0000250 334..349 4/15 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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