DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrRII and CHRM3

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_000731.1 Gene:CHRM3 / 1131 HGNCID:1952 Length:590 Species:Homo sapiens


Alignment Length:631 Identity:151/631 - (23%)
Similarity:251/631 - (39%) Gaps:150/631 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DAMLPYSKLL---STALTVASGNSNSSDGTLLLIQTSAAPGGDVMATGAGAGKLGVPSMNSYLVS 69
            ||.||...:.   |..::.|:||.:|.|||     |....||..:                    
Human    26 DAGLPPGTVTHFGSYNVSRAAGNFSSPDGT-----TDDPLGGHTV-------------------- 65

  Fly    70 MAWPKSLAVAVFL--VIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSV 132
              |  .:....||  ::.|||::||.|||::....::|:||.|.|:::||..|.::|...|....
Human    66 --W--QVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFT 126

  Fly   133 VLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMIL 197
            ...|...|..|.:.||:|:::|.:..:.|:::|..||.|||.::|:||||..||.:|| |.:||.
Human   127 TYIIMNRWALGNLACDLWLAIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKR-AGVMIG 190

  Fly   198 VVWITALSITCPPYLGW-YEVGRHQAEFVDCRYNQNKGYVVF---------SAMGSFFIPLTVML 252
            :.|:.:..:..|..|.| |.||:......:|       ::.|         :|:.:|::|:|:|.
Human   191 LAWVISFVLWAPAILFWQYFVGKRTVPPGEC-------FIQFLSEPTITFGTAIAAFYMPVTIMT 248

  Fly   253 YVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFI---------SESE--------------- 293
            .:|.:| |..|.:|.:.:....:..|   :.:.:||:         |..|               
Human   249 ILYWRI-YKETEKRTKELAGLQASGT---EAETENFVHPTGSSRSCSSYELQQQSMKRSNRRKYG 309

  Fly   294 --HYHCTPTKWLPNRKSRWRFNSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGA 356
              |:..|...|.|:.:   :.:..|....|...|.||...::|        .||.....|:...|
Human   310 RCHFWFTTKSWKPSSE---QMDQDHSSSDSWNNNDAAASLENS--------ASSDEEDIGSETRA 363

  Fly   357 GVVDKTLTFKHQPTFYE------------------LVEVSRLSSLIHCSAISCKYGGPCMHSTPS 403
             :....|......|...                  :|::.|.:..:.... |...||    |.|.
Human   364 -IYSIVLKLPGHSTILNSTKLPSSDNLQVPEEELGMVDLERKADKLQAQK-SVDDGG----SFPK 422

  Fly   404 GMHYVGTE-ASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQRSSFDHHHPHAHH 467
            ....:..: .|..||....:| |::...:|.|:.|...|  ...||:...:.||.....      
Human   423 SFSKLPIQLESAVDTAKTSDV-NSSVGKSTATLPLSFKE--ATLAKRFALKTRSQITKR------ 478

  Fly   468 HGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYLLIPFLPR--PAVL 530
                             .|:|..| :.|.|:||:.::...|..|.|:.:..|:..|...  |...
Human   479 -----------------KRMSLVK-EKKAAQTLSAILLAFIITWTPYNIMVLVNTFCDSCIPKTF 525

  Fly   531 EDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRLTCRPICKQKR 576
            .:|.:   |:.::|..:||..||..|..|||.|..|......|:||
Human   526 WNLGY---WLCYINSTVNPVCYALCNKTFRTTFKMLLLCQCDKKKR 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 65/203 (32%)
TM helix 1 78..101 CDD:410628 10/24 (42%)
TM helix 2 110..132 CDD:410628 7/21 (33%)
TM helix 3 148..170 CDD:410628 6/21 (29%)
TM helix 4 194..210 CDD:410628 3/15 (20%)
TM helix 5 233..256 CDD:410628 6/31 (19%)
7tm_GPCRs <491..563 CDD:475119 22/73 (30%)
TM helix 6 497..519 CDD:320098 6/21 (29%)
TM helix 7 531..556 CDD:320098 7/24 (29%)
CHRM3NP_000731.1 7tmA_mAChR_M3 66..>270 CDD:320426 66/214 (31%)
TM helix 1 70..96 CDD:320426 10/25 (40%)
TM helix 2 103..130 CDD:320426 7/26 (27%)
TM helix 3 141..171 CDD:320426 11/29 (38%)
TM helix 4 183..206 CDD:320426 7/23 (30%)
TM helix 5 228..257 CDD:320426 8/29 (28%)
Basolateral sorting signal 275..281 1/5 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..357 8/44 (18%)
7tm_GPCRs <484..564 CDD:475119 24/83 (29%)
TM helix 6 490..512 CDD:320426 6/21 (29%)
TM helix 7 523..548 CDD:320426 7/27 (26%)

Return to query results.
Submit another query.