DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and hrh4.d1

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_004915714.2 Gene:hrh4.d1 / 101734803 XenbaseID:XB-GENE-22168426 Length:382 Species:Xenopus tropicalis


Alignment Length:505 Identity:118/505 - (23%)
Similarity:181/505 - (35%) Gaps:184/505 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYITGTW 140
            |.:.:.|:|||: |:||::||||.:..:|||:.:|.|::||||.|:|||...:|..:....:|.|
 Frog    35 LIILIALLIILI-VLGNSIVILAFIVDKRLRSQSNFFLLNLAICDFLVGAFSIPLYIPFLFSGKW 98

  Fly   141 RFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTY-SKKRRSKRLALLMILVVWITAL 204
            ..|..||.:|:.||....:.|...:..||.||:|:||:.:.| :::||..:.||.|: |.||.:.
 Frog    99 MLGRFLCKLWLILDFTTSAASAFGVVLISYDRFLSVTKAVLYRTQQRRHSQTALKMV-VAWIFSF 162

  Fly   205 SITCPPYLGW------YEVGRH--QAEFVDCRYNQNKGYVVFSAMGSFFIPLTVMLYVYVKIGYV 261
            .|..|..:.|      ||...:  :|.|.|..|     :::.::...|..|:..:.:..::|   
 Frog   163 LIYGPAIIFWEILTGTYETNEYSCRAGFFDAWY-----FLLCASSLDFAFPMISISFFNMRI--- 219

  Fly   262 LTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFNSLHDPPPSAATNA 326
                                                   .|...::||.:.||            
 Frog   220 ---------------------------------------YWNIKKRSRKKRNS------------ 233

  Fly   327 AAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSAISC 391
                            |..:                   :.|.|     |.|......|. .:||
 Frog   234 ----------------CQMS-------------------EEQKT-----EASPYIIATHI-VLSC 257

  Fly   392 KYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQRS 456
                      |.|...|                :::...|.|..|             ||..:.|
 Frog   258 ----------PKGKEKV----------------DSSLNKTVNDFA-------------KQSFEPS 283

  Fly   457 SFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTK--RDSKTAKTLTIVMGGLIACWLPFFVYYL 519
            |.....|                    |.|||..|  ||.|.|::|||::.....||.|   |..
 Frog   284 SQTMSGP--------------------PNRVSVIKLSRDKKVARSLTILVSVFALCWAP---YSF 325

  Fly   520 LIPFLPRPAVLEDLMFGF------TWIGWVNCAINPFIYAFYNPDFRTAF 563
            |:..   .|..:.....|      .|:.|.|.||||.:|...:..||.||
 Frog   326 LVSI---RAACQGYCIDFFWYKVTAWLLWTNSAINPVLYPMCHKSFRKAF 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 62/200 (31%)
TM helix 1 78..101 CDD:410628 11/22 (50%)
TM helix 2 110..132 CDD:410628 11/21 (52%)
TM helix 3 148..170 CDD:410628 5/21 (24%)
TM helix 4 194..210 CDD:410628 5/15 (33%)
TM helix 5 233..256 CDD:410628 2/22 (9%)
7tm_GPCRs <491..563 CDD:475119 25/79 (32%)
TM helix 6 497..519 CDD:320098 8/21 (38%)
TM helix 7 531..556 CDD:320098 9/30 (30%)
hrh4.d1XP_004915714.2 7tmA_Histamine_H3R_H4R 47..372 CDD:320176 111/490 (23%)
TM helix 2 67..94 CDD:320176 11/26 (42%)
TM helix 3 105..135 CDD:320176 10/29 (34%)
TM helix 4 150..168 CDD:320176 7/18 (39%)
TM helix 5 193..223 CDD:320176 5/76 (7%)
TM helix 6 300..330 CDD:320176 12/35 (34%)
TM helix 7 340..365 CDD:320176 9/24 (38%)

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