DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and LOC100490372

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002937327.2 Gene:LOC100490372 / 100490372 XenbaseID:XB-GENE-29080159 Length:405 Species:Xenopus tropicalis


Alignment Length:549 Identity:123/549 - (22%)
Similarity:191/549 - (34%) Gaps:227/549 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 MATGAGAGKLGVPSMNSYLVSMAW---------------PKSLAVAVFLVII-LVTVVGNTLVIL 97
            ||:|....|:.:....|.|.:.::               |:.:||...|.:| |:|.:||.:|.:
 Frog    14 MASGQSRLKMSMDKNVSSLCNFSFSFLRREGNRTALEIAPQQVAVGSLLTVIDLITFLGNAVVFI 78

  Fly    98 AVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYITGTWRFGWILCDIWISLDILLCSGSI 162
            ..:..:||||||..|:|:||:.|.||...|||.|::..:||.|.||...|.:|||.|::.|:.||
 Frog    79 CPVVEKRLRTVTYMFIMSLAMADLLVACLVMPFSIIYEVTGMWLFGKQFCKVWISFDVMFCTASI 143

  Fly   163 LSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILVVWITALSITCPPYL-GWYEV-GRHQAEFV 225
            ::||.||||||.:|..|..|| ||.|:|..::|.:.:|:.:..|:..|.: ||.|: |.......
 Frog   144 VTLCFISLDRYCSVVTPYHYS-KRMSRRRCIIMTVTIWVYSSLISFLPVMQGWNEIPGVDTDNGK 207

  Fly   226 DCRYNQNKGYVVFSAMGSFFIPLTVMLYVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFIS 290
            .|.:..|..:.:.::..:|:||..:|..:|..|......:..|||     .:|.|.         
 Frog   208 QCIFVTNWTFAIVASSLAFYIPFIIMCSMYFFIYRASRLKATRIV-----SQTLDL--------- 258

  Fly   291 ESEHYHCTPTKWLPNRKSRWRFNSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAG 355
               |||       ||.|.:                                              
 Frog   259 ---HYH-------PNSKRQ---------------------------------------------- 267

  Fly   356 AGVVDKTLTFKHQPTFYELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLG 420
                                                                             
 Frog   268 ----------------------------------------------------------------- 267

  Fly   421 GNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPM 485
                        |.:.||                                               
 Frog   268 ------------NNLQLE----------------------------------------------- 273

  Fly   486 RVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYLLIPFLPRPAVLEDLMFGF---TWIGWVNCAI 547
                    :|..:|:.|::...:.||||:||..:||......:....|:..|   ||:|:.|..|
 Frog   274 --------NKATRTMGIIISVFVMCWLPYFVLNVLIAAKGTDSTSRVLVNAFKFITWLGYCNSTI 330

  Fly   548 NPFIYAFYNPDFRTAFWRLTCRPICKQKR 576
            ||.:|||.|.||:.|..:|.   ||::.|
 Frog   331 NPMLYAFLNRDFQRALKKLL---ICRRWR 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 71/194 (37%)
TM helix 1 78..101 CDD:410628 8/23 (35%)
TM helix 2 110..132 CDD:410628 10/21 (48%)
TM helix 3 148..170 CDD:410628 10/21 (48%)
TM helix 4 194..210 CDD:410628 3/15 (20%)
TM helix 5 233..256 CDD:410628 4/22 (18%)
7tm_GPCRs <491..563 CDD:475119 26/74 (35%)
TM helix 6 497..519 CDD:320098 8/21 (38%)
TM helix 7 531..556 CDD:320098 12/27 (44%)
LOC100490372XP_002937327.2 7tmA_amine_R-like 58..346 CDD:320098 110/490 (22%)
TM helix 1 58..83 CDD:320098 8/24 (33%)
TM helix 2 90..117 CDD:320098 12/26 (46%)
TM helix 3 128..158 CDD:320098 16/29 (55%)
TM helix 4 170..190 CDD:320098 4/19 (21%)
TM helix 5 214..270 CDD:320098 19/202 (9%)
TM helix 6 271..301 CDD:320098 11/84 (13%)
TM helix 7 311..339 CDD:320098 12/27 (44%)

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