DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and LOC100488258

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_012818683.1 Gene:LOC100488258 / 100488258 XenbaseID:XB-GENE-29079119 Length:333 Species:Xenopus tropicalis


Alignment Length:523 Identity:119/523 - (22%)
Similarity:171/523 - (32%) Gaps:244/523 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NSYLVSMAWPKSLAV---AVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGT 125
            ||.|.:...|.:.:|   |:|..||| |.|||.|||:::...|:|...||..:::||..|:|:|.
 Frog    10 NSCLRTNRAPANYSVMFIAMFGAIIL-TTVGNLLVIISISHFRQLHYPTNFLILSLATADFLIGL 73

  Fly   126 CVMPPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKR 190
            .|||.|:|..:|..|.||.:.|.:...||:.||:|||..|..||:|||.||..||.|.|...:..
 Frog    74 VVMPYSMVRSLTSCWYFGDLFCKVHSCLDMTLCTGSIYHLFFISVDRYYAVCHPLHYYKNLTTNV 138

  Fly   191 LALLMILVVWITALSITCPPYLG-----------------WYEVGRHQAEFVDCRYNQNKGYVVF 238
            :. |.:|..|    |::|....|                 :|.:|       .|....||.:...
 Frog   139 IE-LFLLTTW----SVSCVFSFGLVFSNVHTEGIQDYITSYYCIG-------SCSLTLNKLWGTI 191

  Fly   239 SAMGSFFIPLTVMLYVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWL 303
            |::..||||..:|:.:|:.|.                                            
 Frog   192 SSLICFFIPGALMIGIYMHIF-------------------------------------------- 212

  Fly   304 PNRKSRWRFNSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQ 368
                             |.|.|.|                                         
 Frog   213 -----------------SVARNQA----------------------------------------- 219

  Fly   369 PTFYELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTN 433
                :||                                                          
 Frog   220 ----KLV---------------------------------------------------------- 222

  Fly   434 TVALETNEKLEAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVS---TTKRDSK 495
                                                       ||||...|.:..   :.:.:.|
 Frog   223 -------------------------------------------HNHHSFQPDKSKSKISVRAERK 244

  Fly   496 TAKTLTIVMGGLIACWLPFFVYYLLIPFLPRPAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFR 560
            .||||:||||..:.||||||:..::.|:: ..:|.|||...|.|:|:.|.|:||.|||.:.|.|:
 Frog   245 AAKTLSIVMGVFLFCWLPFFILTVIDPYI-NFSVPEDLYNVFLWLGYFNSALNPIIYALFYPWFQ 308

  Fly   561 TAF 563
            .||
 Frog   309 KAF 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 70/211 (33%)
TM helix 1 78..101 CDD:410628 13/25 (52%)
TM helix 2 110..132 CDD:410628 9/21 (43%)
TM helix 3 148..170 CDD:410628 9/21 (43%)
TM helix 4 194..210 CDD:410628 5/15 (33%)
TM helix 5 233..256 CDD:410628 7/22 (32%)
7tm_GPCRs <491..563 CDD:475119 32/71 (45%)
TM helix 6 497..519 CDD:320098 14/21 (67%)
TM helix 7 531..556 CDD:320098 13/24 (54%)
LOC100488258XP_012818683.1 7tmA_TAAR2_3_4 23..311 CDD:320437 113/508 (22%)
TM helix 1 24..50 CDD:320437 13/26 (50%)
TM helix 2 57..83 CDD:320437 12/25 (48%)
TM helix 3 95..125 CDD:320437 15/29 (52%)
TM helix 4 137..160 CDD:320437 6/27 (22%)
TM helix 5 185..214 CDD:320437 10/89 (11%)
TM helix 6 240..270 CDD:320437 15/29 (52%)
TM helix 7 279..304 CDD:320437 13/24 (54%)

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