DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and chrm2

DIOPT Version :10

Sequence 1:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002942846.2 Gene:chrm2 / 100485603 XenbaseID:XB-GENE-6034896 Length:470 Species:Xenopus tropicalis


Alignment Length:559 Identity:131/559 - (23%)
Similarity:220/559 - (39%) Gaps:144/559 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NSYLVS--------MAWPKSLAVAVFLVII-----LVTVVGNTLVILAVLTTRRLRTVTNCFVMN 115
            ||.||:        |..|......||:||:     |||::||.||::::...|.|:||.|.|:.:
 Frog     3 NSSLVNVSSTNETMMGSPYKTVEVVFIVIVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFS 67

  Fly   116 LAITDWLVGTCVMPPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPL 180
            ||..|.::|...|....:..:.|.|..|.::||:|::||.::.:.|:::|..||.|||..||:||
 Frog    68 LACADLIIGVFSMNLYTLYTVIGYWPIGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPL 132

  Fly   181 TYSKKRRSKRLALLMILVVWITALSITCPPYLGW-YEVGRHQAEFVDC--RYNQNKGYVVFSAMG 242
            || ..||:.::|.:||...|:.:..:..|..|.| :.||.......:|  ::..|......:|:.
 Frog   133 TY-PVRRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGGRTVPEGECYIQFFSNAAVTFGTAIA 196

  Fly   243 SFFIPLTVMLYVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRK 307
            :|::|:.:|..:|.:|.....||.::..::|                             .||: 
 Frog   197 AFYLPVIIMTVLYWQISRASKSRIKKGKKEA-----------------------------APNQ- 231

  Fly   308 SRWRFNSLHDP-PPSAATNAAAKGHQSSVKCS---------KCSKCSSATGTAGAGAGAGVVDKT 362
                     || .||.......|.:.::|..:         :..|.:|.:|........|     
 Frog   232 ---------DPISPSNVQGKIVKPNNNNVAANEDGLDHGKIQNGKVTSNSGIENCVQAEG----- 282

  Fly   363 LTFKHQPTFYELVEVSRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSD-----TCL--- 419
                      |..|:|..|:.:  |.::.|..| .....|...   |::|:...     ||:   
 Frog   283 ----------EEKEISNDSTSV--SVVNTKDEG-AAKDVPQAS---GSQANPKTENSKLTCIRIV 331

  Fly   420 ----GGNVSNNTTTTT-----TNTVALETNEKLEAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQS 475
                .|:.||.|.||.     .|....|..:.:.|....|..:|                     
 Frog   332 TKSPKGDCSNATGTTVEIVPGANGRNGEDKQNIVARKIVKMTKQ--------------------- 375

  Fly   476 HHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYLLIPF----LPRPAVLEDLMFG 536
                   .|.:.....|:.|..:|:..::...|..|.|:.|..|:..|    :|...    ...|
 Frog   376 -------PPKKKLPPSREKKVTRTILAILLAFIITWTPYNVMVLINTFCAVCVPNTV----WTIG 429

  Fly   537 FTWIGWVNCAINPFIYAFYNPDFRTAFWRLTCRPICKQK 575
            : |:.::|..|||..||..|..|:..|..|.   :|:.|
 Frog   430 Y-WLCYINSTINPACYALCNTTFKKTFKHLL---MCQYK 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 64/199 (32%)
TM helix 1 78..101 CDD:410628 11/27 (41%)
TM helix 2 110..132 CDD:410628 7/21 (33%)
TM helix 3 148..170 CDD:410628 7/21 (33%)
TM helix 4 194..210 CDD:410628 3/15 (20%)
TM helix 5 233..256 CDD:410628 4/22 (18%)
7tm_GPCRs <491..563 CDD:475119 20/75 (27%)
TM helix 6 497..519 CDD:320098 5/21 (24%)
TM helix 7 531..556 CDD:320098 8/24 (33%)
chrm2XP_002942846.2 7tmA_mAChR_M2 27..455 CDD:320424 121/521 (23%)
TM helix 1 28..54 CDD:320424 10/25 (40%)
TM helix 2 61..87 CDD:320424 7/25 (28%)
TM helix 3 99..129 CDD:320424 12/29 (41%)
TM helix 4 141..164 CDD:320424 5/22 (23%)
TM helix 5 186..215 CDD:320424 7/28 (25%)
TM helix 6 384..414 CDD:320424 8/29 (28%)
TM helix 7 423..448 CDD:320424 8/29 (28%)

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