DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRII and hrh2b

DIOPT Version :9

Sequence 1:NP_001262682.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001103208.1 Gene:hrh2b / 100005590 ZFINID:ZDB-GENE-070928-20 Length:335 Species:Danio rerio


Alignment Length:528 Identity:119/528 - (22%)
Similarity:178/528 - (33%) Gaps:248/528 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 KSLAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSVVLYI-T 137
            ::|...|.:..|.:|:.||.||.:||.|:|||..:::||:::||:||.|:|..|:|.|.:|.: .
Zfish     4 RALCWVVLVAFIALTICGNILVCMAVATSRRLHQLSSCFILSLAVTDLLLGLLVLPLSAMLELRN 68

  Fly   138 GTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMILVVWIT 202
            |.|..|.:.|:|:||:|::|.|.|||:|.|||:|||||::.||.|.::...:|:| :.:..:|..
Zfish    69 GKWPLGGVFCNIYISMDVMLSSASILTLLAISVDRYLAISNPLFYPRRVTPRRVA-IALTAIWTC 132

  Fly   203 ALSITCPPY-LGWY-----------------EVGRHQAEFVDCRYNQNKGYVVFSAMGSFFIPLT 249
            :|:::.... |||.                 |.||      .|||..|..||:..|.|.|::||.
Zfish   133 SLAVSFVSINLGWNSPDFRVQNLDWSMWGEGEEGR------TCRYEWNNNYVLLKAFGIFYLPLL 191

  Fly   250 VMLYVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFISESEHYHCTPTKWLPNRKSRWRFNS 314
            ||..:|.:|..|...:.:||       |.|                                   
Zfish   192 VMCGMYHRIFCVAREQVRRI-------RAA----------------------------------- 214

  Fly   315 LHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEVSR 379
              .|..:.|.||||                                                   
Zfish   215 --TPSSAQAANAAA--------------------------------------------------- 226

  Fly   380 LSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEKLE 444
                                                                             
Zfish   227 ----------------------------------------------------------------- 226

  Fly   445 AEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIA 509
                                                         |.|:.|...||..|:|..|.
Zfish   227 ---------------------------------------------TAREHKATVTLAAVLGAFII 246

  Fly   510 CWLPFFVYYLLIPF-------LPRPAVLEDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRLT 567
            ||.|:|.|:..:..       |....||        |:|::|.|:||.:|...|.||..|..:|.
Zfish   247 CWFPYFTYFTYMGMWAIHPNKLTHSIVL--------WLGYLNSALNPILYPALNRDFHQACGQLL 303

  Fly   568 CRPICKQK 575
            ||  |.:|
Zfish   304 CR--CGKK 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRIINP_001262682.1 7tm_4 82..>212 CDD:304433 53/131 (40%)
7tm_1 91..>277 CDD:278431 75/204 (37%)
hrh2bNP_001103208.1 7tm_1 21..288 CDD:278431 105/486 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

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