Sequence 1: | NP_524393.2 | Gene: | Lgr1 / 42133 | FlyBaseID: | FBgn0016650 | Length: | 831 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001240656.1 | Gene: | RXFP1 / 59350 | HGNCID: | 19718 | Length: | 784 | Species: | Homo sapiens |
Alignment Length: | 807 | Identity: | 170/807 - (21%) |
---|---|---|---|
Similarity: | 298/807 - (36%) | Gaps: | 262/807 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 88 PLTATMPRSAWKCCCWNASNQAEEVECRCEGDGLNRVPQTLT--------------LP------- 131
Fly 132 --IQRLTIASAGLPRLRHTGLKVY---GSTLLDVAFTDCLQLELIQDGAFANLTLLRTIYITNAP 191
Fly 192 KLTFLSKDVFLGISDTVDIIRIINSGLTRVPD---LGHLPPHNILQMIDLDNNQI------TRID 247
Fly 248 SKSIKVKTAQLILTNNEISYVDDSAFFG-SKIAKLSLKENKKLQMMHPNAFDGIIDITELDLSST 311
Fly 312 S-----------LVGLPSAGLQNIEALYIQNTHTLKTIPSIYNFRNLQRAYLTHSFHCCAFQFPS 365
Fly 366 RHDPQRHAQRMLEIEKWRKQCKSDSGTRKERSTLDNPFNMPEDFGSFGGTDDSATDITPITFASF 430
Fly 431 DYMADDTMNKGTFHEKIILNPGDDSSAELCGNFTFRKPNI-ECYPMPNDLNPCEDVMGYQWLRIS 494
Fly 495 VWIVVALAVVGNVAVLTVILSIRPESTPVPRFLMCHLAFADLCLGLYLLLVACIDAHSMGEYFNF 559
Fly 560 AYDWQYGLGCKVAGFLTVFASHLSVFTLTVITIERWLAITQAMYLNHRIKLRPAALIMLGGWIYS 624
Fly 625 MLMSSLPL----FGISNYSSTSICLPMENRD---VYDTIYLIAI-LGSNGVAFSIIAVCYAQIYL 681
Fly 682 SLGRETRQAHQNS----------PGELSVAKKMALLVFTNFACWSPI---AFFGLTALAGYPLIN 733
Fly 734 VTKSKILLVFFYPLNSCADPYLYAILTS-----------QYRQ---------------------- 765
Fly 766 ------------DLFTLLSKLGLCQQS 780 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr1 | NP_524393.2 | leucine-rich repeat | 182..207 | CDD:275380 | 6/24 (25%) |
leucine-rich repeat | 208..231 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 233..256 | CDD:275380 | 8/28 (29%) | ||
leucine-rich repeat | 257..277 | CDD:275380 | 4/20 (20%) | ||
LRR_8 | 258..313 | CDD:290566 | 14/66 (21%) | ||
leucine-rich repeat | 278..302 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 303..323 | CDD:275380 | 8/30 (27%) | ||
leucine-rich repeat | 324..346 | CDD:275380 | 4/21 (19%) | ||
7tm_1 | 505..756 | CDD:278431 | 74/271 (27%) | ||
RXFP1 | NP_001240656.1 | LDLa | 27..62 | CDD:238060 | |
leucine-rich repeat | 155..178 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 179..237 | CDD:290566 | 11/63 (17%) | ||
leucine-rich repeat | 179..202 | CDD:275380 | 5/27 (19%) | ||
LRR_RI | <196..358 | CDD:238064 | 41/171 (24%) | ||
leucine-rich repeat | 203..226 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 226..286 | CDD:290566 | 18/64 (28%) | ||
leucine-rich repeat | 227..250 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 251..275 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 274..334 | CDD:290566 | 17/67 (25%) | ||
leucine-rich repeat | 276..299 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 300..323 | CDD:275380 | 5/26 (19%) | ||
LRR_8 | 323..379 | CDD:290566 | 15/56 (27%) | ||
leucine-rich repeat | 324..347 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 348..371 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 372..393 | CDD:275380 | 10/102 (10%) | ||
7tm_1 | 451..708 | CDD:278431 | 72/269 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |