Sequence 1: | NP_524393.2 | Gene: | Lgr1 / 42133 | FlyBaseID: | FBgn0016650 | Length: | 831 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001315011.1 | Gene: | rxfp2b / 566888 | ZFINID: | ZDB-GENE-110408-27 | Length: | 750 | Species: | Danio rerio |
Alignment Length: | 750 | Identity: | 164/750 - (21%) |
---|---|---|---|
Similarity: | 281/750 - (37%) | Gaps: | 243/750 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 100 CCCWNASNQAEEVECRCEGDGLNRVPQT--------------LTLP---------IQRLTI---- 137
Fly 138 -------ASAGLPRLRHTGLKVYGSTLLDVAFTDCLQLELIQDGAFANLTLLRTIYITNAPKLTF 195
Fly 196 LSKDVFLGISDTVDIIRIINSGLTRVPD---LGHLPPHNILQMIDLDNNQITRID---------- 247
Fly 248 ---------SKSIKVKTAQ-------LILTNNEISYVDDSAFFGSK-IAKLSLKENKKLQMMHPN 295
Fly 296 AFDGIIDITELDLSSTSLVGLPSAGLQNIEALYIQNTHTLKTIPSIYNFRNLQRAYLTHSFHCCA 360
Fly 361 FQFPSRHDPQRHAQRMLEIEKWRKQCKSDSGTRKERSTLDNPFNMPEDFGSFGGTDDSATDITPI 425
Fly 426 TFASFDYMADDTMNKGTFHEKIILNPGDDSSAELCGNFTFRKPNI-ECYPMPNDLNPCEDVMGYQ 489
Fly 490 WLRISVWIVVALAVVGNVAVLTVILSIRPESTPVPRFLMCHLAFADLCLGLYLLLVACIDAHSMG 554
Fly 555 EYFNFAYDWQYGLGCKVAGFLTVFASHLSVFTLTVITIERWLAITQAMYLNHRIKLRPAA----L 615
Fly 616 IMLGGWIYSMLMSSLPL-----FGISNYSSTSICLPMENRDVYDTI---YLIAI-LGSNGVAFSI 671
Fly 672 IAVCYAQIYLSLGRETRQAHQNSPGEL----SVAKKMALLVFTNFACWSPIAFFGLTALAGYPLI 732
Fly 733 NVTKSKILLVFFYPLNSCADPYLYAILTSQYRQDL 767 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr1 | NP_524393.2 | leucine-rich repeat | 182..207 | CDD:275380 | 6/24 (25%) |
leucine-rich repeat | 208..231 | CDD:275380 | 5/25 (20%) | ||
leucine-rich repeat | 233..256 | CDD:275380 | 7/41 (17%) | ||
leucine-rich repeat | 257..277 | CDD:275380 | 7/26 (27%) | ||
LRR_8 | 258..313 | CDD:290566 | 13/55 (24%) | ||
leucine-rich repeat | 278..302 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 303..323 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 324..346 | CDD:275380 | 4/21 (19%) | ||
7tm_1 | 505..756 | CDD:278431 | 75/267 (28%) | ||
rxfp2b | NP_001315011.1 | LDLa | 39..74 | CDD:238060 | |
leucine-rich repeat | 114..132 | CDD:275380 | 5/17 (29%) | ||
LRR_RI | 130..360 | CDD:238064 | 54/273 (20%) | ||
leucine-rich repeat | 133..156 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 156..215 | CDD:290566 | 14/72 (19%) | ||
leucine-rich repeat | 157..180 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 181..204 | CDD:275380 | 6/35 (17%) | ||
LRR_8 | 203..288 | CDD:290566 | 16/89 (18%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 229..253 | CDD:275380 | 5/26 (19%) | ||
leucine-rich repeat | 254..277 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 277..336 | CDD:290566 | 13/59 (22%) | ||
leucine-rich repeat | 278..301 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 302..325 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 324..378 | CDD:290566 | 20/149 (13%) | ||
leucine-rich repeat | 326..349 | CDD:275380 | 8/36 (22%) | ||
leucine-rich repeat | 350..369 | CDD:275380 | 9/40 (23%) | ||
7tm_4 | 419..>556 | CDD:304433 | 40/142 (28%) | ||
7tm_1 | <487..686 | CDD:278431 | 56/206 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |