Sequence 1: | NP_524393.2 | Gene: | Lgr1 / 42133 | FlyBaseID: | FBgn0016650 | Length: | 831 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000224.2 | Gene: | LHCGR / 3973 | HGNCID: | 6585 | Length: | 699 | Species: | Homo sapiens |
Alignment Length: | 748 | Identity: | 274/748 - (36%) |
---|---|---|---|
Similarity: | 400/748 - (53%) | Gaps: | 102/748 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 LTATMPRSAWKCCCWNASNQAEEVECRCEGDGLNRVPQTLTLPIQRLTIASAG---LPRLRHTGL 150
Fly 151 KVYGSTLLDVAFTDCLQLELIQDGAFANLTLLRTIYITNAPKLTFLSKDVFLGISDTVDIIRIIN 215
Fly 216 SGLTRVPDLGHL---PPHNILQMID------LDNNQITRIDSKSIKVKTAQLILTNNEISYVDDS 271
Fly 272 AFFGSKIAKLSLKENKKLQMMHPNAFDGIIDITELDLSSTSLVGLPSAGLQNIEALYIQNTHTLK 336
Fly 337 TIPSIYNFRNLQRAYLTHSFHCCAFQ-FPSRHDPQRHAQRMLEIEKWRKQCKSDSGTRKERSTLD 400
Fly 401 NPFNMPEDFGSFGGTDDSATDITPITFASFDYMADDTMNKGTFHEKIILNPGDDSSAELCG---N 462
Fly 463 FTFRKPNI-ECYPMPNDLNPCEDVMGYQWLRISVWIVVALAVVGNVAVLTVILSIRPESTPVPRF 526
Fly 527 LMCHLAFADLCLGLYLLLVACIDAHSMGEYFNFAYDWQYGLGCKVAGFLTVFASHLSVFTLTVIT 591
Fly 592 IERWLAITQAMYLNHRIKLRPAALIMLGGWIYSMLMSSLPLFGISNYSSTSICLPMENRDVYDTI 656
Fly 657 YLIAILGSNGVAFSIIAVCYAQIYLSLGRETRQAHQNSPGELSVAKKMALLVFTNFACWSPIAFF 721
Fly 722 GLTALAGYPLINVTKSKILLVFFYPLNSCADPYLYAILTSQYRQDLFTLLSKLGLCQQSALKYK- 785
Fly 786 ---DSLSGQATTRFTIHGSIQRHSSLTCKMQTV 815 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr1 | NP_524393.2 | leucine-rich repeat | 182..207 | CDD:275380 | 6/24 (25%) |
leucine-rich repeat | 208..231 | CDD:275380 | 5/25 (20%) | ||
leucine-rich repeat | 233..256 | CDD:275380 | 5/28 (18%) | ||
leucine-rich repeat | 257..277 | CDD:275380 | 6/19 (32%) | ||
LRR_8 | 258..313 | CDD:290566 | 22/54 (41%) | ||
leucine-rich repeat | 278..302 | CDD:275380 | 11/23 (48%) | ||
leucine-rich repeat | 303..323 | CDD:275380 | 11/19 (58%) | ||
leucine-rich repeat | 324..346 | CDD:275380 | 7/21 (33%) | ||
7tm_1 | 505..756 | CDD:278431 | 133/250 (53%) | ||
LHCGR | NP_000224.2 | leucine-rich repeat | 51..74 | CDD:275380 | 6/26 (23%) |
LRR_5 | 62..198 | CDD:290045 | 33/145 (23%) | ||
leucine-rich repeat | 75..99 | CDD:275380 | 7/23 (30%) | ||
LRR 1 | 96..115 | 7/18 (39%) | |||
leucine-rich repeat | 100..124 | CDD:275380 | 6/24 (25%) | ||
LRR 2 | 124..145 | 5/20 (25%) | |||
leucine-rich repeat | 125..150 | CDD:275380 | 5/24 (21%) | ||
LRR 3 | 149..171 | 4/21 (19%) | |||
leucine-rich repeat | 151..174 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 175..198 | CDD:275380 | 8/27 (30%) | ||
LRR 4 | 175..196 | 7/25 (28%) | |||
LRR 5 | 198..220 | 10/21 (48%) | |||
leucine-rich repeat | 199..223 | CDD:275380 | 11/23 (48%) | ||
LRR 6 | 223..244 | 11/20 (55%) | |||
leucine-rich repeat | 224..244 | CDD:275380 | 11/19 (58%) | ||
7tm_1 | 376..623 | CDD:278431 | 133/250 (53%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165158088 | |
Domainoid | 1 | 1.000 | 279 | 1.000 | Domainoid score | I1700 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H37276 | |
Inparanoid | 1 | 1.050 | 435 | 1.000 | Inparanoid score | I1705 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5552 |
OMA | 1 | 1.010 | - | - | QHG51461 | |
OrthoDB | 1 | 1.010 | - | - | D136124at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001622 | |
OrthoInspector | 1 | 1.000 | - | - | otm40601 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104064 | |
Panther | 1 | 1.100 | - | - | O | PTHR24372 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3294 |
SonicParanoid | 1 | 1.000 | - | - | X1188 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
17 | 16.750 |