DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atg8b and ATG12

DIOPT Version :9

Sequence 1:NP_001303480.1 Gene:Atg8b / 42132 FlyBaseID:FBgn0038539 Length:120 Species:Drosophila melanogaster
Sequence 2:NP_004698.3 Gene:ATG12 / 9140 HGNCID:588 Length:140 Species:Homo sapiens


Alignment Length:71 Identity:21/71 - (29%)
Similarity:31/71 - (43%) Gaps:2/71 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KKYLVPADLTVGQFYFLIRKRINLRPDDALFFFVNNVIPPT-SATMGALYQEHFDKDYFLYISYT 112
            ||:.|....|:......|:|.:.|...:.||.:||....|: ...:|.|| |.|..|..|.:.|.
Human    71 KKWAVERTRTIQGLIDFIKKFLKLVASEQLFIYVNQSFAPSPDQEVGTLY-ECFGSDGKLVLHYC 134

  Fly   113 DENVYG 118
            ....:|
Human   135 KSQAWG 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8bNP_001303480.1 GABARAP 7..118 CDD:176355 20/69 (29%)
ATG12NP_004698.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50
APG12 54..140 CDD:252381 20/69 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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