Protein Alignment Atg8b and ATG8C

DIOPT Version :9

• Sequence 1: NP_001303480.1
• Gene: Atg8b / 42132
• FlyBaseID: FBgn0038539
• Length: 120
• Species: Drosophila melanogaster
• Sequence 2: NP_176395.1
• Gene: ATG8C / 842499
• AraportID: AT1G62040
• Length: 119
• Species: Arabidopsis thaliana
• Alignment Length: 115
• Identity: 61/115 - (53%)
• Similarity: 86/115 - (74%)
• Gaps: 0/115 - (0%)

  Fly     4 NYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFYFLIRK 68
            |..:|.:|..::|:.|..:||.|||||:|||||:|.::....:||||||||||||||||.:::||
plant     3 NSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRK 67

  Fly    69 RINLRPDDALFFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
            ||.|..:.|:|.||.|.:|||:|.|.|:|.|:.|:|.|||::|:.||.:|
plant    68 RIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg8b	NP_001303480.1	GABARAP	7..118	CDD:176355	59/110 (54%)
ATG8C	NP_176395.1	Ubl_ATG8	12..114	CDD:340545	55/101 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	144	1.000	Domainoid score	I1480
eggNOG	1	0.900	-	-		E1_KOG1654
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	155	1.000	Inparanoid score	I1674
OMA	1	1.010	-	-		QHG54038
OrthoDB	1	1.010	-	-		D1508198at2759
OrthoFinder	1	1.000	-	-		FOG0000590
OrthoInspector	1	1.000	-	-		mtm1018
orthoMCL	1	0.900	-	-		OOG6_100707
Panther	1	1.100	-	-	O	PTHR10969
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X355
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	13	12.840