DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg8b and ATG8F

DIOPT Version :9

Sequence 1:NP_001303480.1 Gene:Atg8b / 42132 FlyBaseID:FBgn0038539 Length:120 Species:Drosophila melanogaster
Sequence 2:NP_001329226.1 Gene:ATG8F / 827351 AraportID:AT4G16520 Length:121 Species:Arabidopsis thaliana


Alignment Length:88 Identity:50/88 - (56%)
Similarity:66/88 - (75%) Gaps:0/88 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VPVIVEKAPKTRYAELDKKKYLVPADLTVGQFYFLIRKRINLRPDDALFFFVNNVIPPTSATMGA 95
            :.||||||.|:....:||||||||||||||||.::|||||.|..:.|:|.||:||:||..|.|.:
plant    30 IQVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSS 94

  Fly    96 LYQEHFDKDYFLYISYTDENVYG 118
            :|:|..|.|.|||::|:.||.:|
plant    95 VYEEKKDDDGFLYVTYSGENTFG 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8bNP_001303480.1 GABARAP 7..118 CDD:176355 49/86 (57%)
ATG8FNP_001329226.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 144 1.000 Domainoid score I1480
eggNOG 1 0.900 - - E1_KOG1654
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 155 1.000 Inparanoid score I1674
OMA 1 1.010 - - QHG54038
OrthoDB 1 1.010 - - D1508198at2759
OrthoFinder 1 1.000 - - FOG0000590
OrthoInspector 1 1.000 - - mtm1018
orthoMCL 1 0.900 - - OOG6_100707
Panther 1 1.100 - - O PTHR10969
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X355
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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