DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg8b and ATG8D

DIOPT Version :10

Sequence 1:NP_650649.1 Gene:Atg8b / 42132 FlyBaseID:FBgn0038539 Length:120 Species:Drosophila melanogaster
Sequence 2:NP_001154497.1 Gene:ATG8D / 815112 AraportID:AT2G05630 Length:164 Species:Arabidopsis thaliana


Alignment Length:107 Identity:63/107 - (58%)
Similarity:85/107 - (79%) Gaps:0/107 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFYFLIRKRINLRPDD 76
            |..||:.|..:||.|||||:|||||:|.|:...::|:||||||||||||||.:::||||.|.|:.
plant    55 SLKKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEK 119

  Fly    77 ALFFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
            |:|.||.|::|||:|.|.|:|:||.|:|.|||:||:.||.:|
plant   120 AIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8bNP_650649.1 Ubl_ATG8_GABARAP_like 7..113 CDD:340544 60/100 (60%)
ATG8DNP_001154497.1 Ubl_ATG8 56..158 CDD:340545 59/101 (58%)

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