Protein Alignment Atg8b and map1lc3c

DIOPT Version :9

• Sequence 1: NP_001303480.1
• Gene: Atg8b / 42132
• FlyBaseID: FBgn0038539
• Length: 120
• Species: Drosophila melanogaster
• Sequence 2: NP_001037987.1
• Gene: map1lc3c / 733779
• XenbaseID: XB-GENE-1003533
• Length: 124
• Species: Xenopus tropicalis
• Alignment Length: 114
• Identity: 46/114 - (40%)
• Similarity: 71/114 - (62%)
• Gaps: 2/114 - (1%)

  Fly     7 YKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAE-LDKKKYLVPADLTVGQFYFLIRKRI 70
            :|:..|...|:.|...|:.|:|.::|||||:..:.:|.. |||.|:|||.||::.||..:||.|:
 Frog    11 FKQRKSLASRKEEVIGIKAKFPTKIPVIVERYRREKYLPLLDKTKFLVPKDLSMMQFINIIRNRM 75

  Fly    71 NLRPDDALFFFVNN-VIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
            ||....|.:..||| .:...|.||..||::|.|:|.|||::|..:.::|
 Frog    76 NLSATQAFYLLVNNKSLASMSLTMAELYRDHKDEDGFLYMTYASQEMFG 124

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg8b	NP_001303480.1	GABARAP	7..118	CDD:176355	45/112 (40%)
map1lc3c	NP_001037987.1	Ubl_ATG8_MAP1LC3C	11..123	CDD:340756	45/111 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54038
OrthoDB	1	1.010	-	-		D1508198at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.930