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Protein Alignment Atg8b and Map1lc3a
DIOPT Version :9
Sequence 1: | NP_001303480.1 |
Gene: | Atg8b / 42132 |
FlyBaseID: | FBgn0038539 |
Length: | 120 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_080011.1 |
Gene: | Map1lc3a / 66734 |
MGIID: | 1915661 |
Length: | 121 |
Species: | Mus musculus |
Alignment Length: | 120 |
Identity: | 38/120 - (31%) |
Similarity: | 67/120 - (55%) |
Gaps: | 2/120 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDMNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEK-APKTRYAELDKKKYLVPADLTVGQFYF 64
|..:..:|:..||..|..|..:||.::|.::|||:|: ..:.:...|||.|:|||..:.:.:...
Mouse 1 MPSDRPFKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVK 65
Fly 65 LIRKRINLRPDDALFFFVN-NVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
:||:|:.|.|..|.|..|| :.:...|..:..:|::..|:|.|||:.|..:..:|
Mouse 66 IIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1654 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG54038 |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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