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Protein Alignment Atg8b and MAP1LC3C
DIOPT Version :9
Sequence 1: | NP_001303480.1 |
Gene: | Atg8b / 42132 |
FlyBaseID: | FBgn0038539 |
Length: | 120 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001004343.1 |
Gene: | MAP1LC3C / 440738 |
HGNCID: | 13353 |
Length: | 147 |
Species: | Homo sapiens |
Alignment Length: | 114 |
Identity: | 45/114 - (39%) |
Similarity: | 73/114 - (64%) |
Gaps: | 2/114 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 YKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPK-TRYAELDKKKYLVPADLTVGQFYFLIRKRI 70
:|:..|...|:.|...||.|:|:::||:||:.|: |....|||.|:|||.:||:.||..:||.|:
Human 13 FKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRM 77
Fly 71 NLRPDDALFFFVNN-VIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
.||..:|.:..||| .:...||||..:|:::.|:|.|:|::|..:..:|
Human 78 VLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1654 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S125 |
OMA |
1 |
1.010 |
- |
- |
|
QHG54038 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1508198at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.780 |
|
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