Protein Alignment Atg8b and map1lc3c

DIOPT Version :9

• Sequence 1: NP_001303480.1
• Gene: Atg8b / 42132
• FlyBaseID: FBgn0038539
• Length: 120
• Species: Drosophila melanogaster
• Sequence 2: NP_956592.1
• Gene: map1lc3c / 393268
• ZFINID: ZDB-GENE-040426-1080
• Length: 128
• Species: Danio rerio
• Alignment Length: 116
• Identity: 45/116 - (38%)
• Similarity: 73/116 - (62%)
• Gaps: 2/116 - (1%)

  Fly     7 YKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRY-AELDKKKYLVPADLTVGQFYFLIRKRI 70
            :|:..|...|:.|...||.|:|.::|||:|:..:.:: ..|||.|:|||.:||:.||..:||.|:
Zfish    13 FKQRKSLATRKQEVAGIRTKFPTKIPVIIERYQREKFLPPLDKTKFLVPQELTMTQFVTIIRNRM 77

  Fly    71 NLRPDDALFFFVNNV-IPPTSATMGALYQEHFDKDYFLYISYTDENVYGRQ 120
            .|.|:.|.:..:||. |...|.||..||::|.|:|.|||::|..:.::|.:
Zfish    78 TLMPNQAFYLLINNSGIASMSMTMAQLYKDHKDEDGFLYMTYASQEMFGHR 128

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg8b	NP_001303480.1	GABARAP	7..118	CDD:176355	44/112 (39%)
map1lc3c	NP_956592.1	GABARAP	13..126	CDD:176355	44/112 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54038
OrthoDB	1	1.010	-	-		D1508198at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.930