Protein Alignment Atg8b and Map1lc3a

DIOPT Version :9

• Sequence 1: NP_001303480.1
• Gene: Atg8b / 42132
• FlyBaseID: FBgn0038539
• Length: 120
• Species: Drosophila melanogaster
• Sequence 2: NP_955794.1
• Gene: Map1lc3a / 362245
• RGDID: 735183
• Length: 121
• Species: Rattus norvegicus
• Alignment Length: 120
• Identity: 38/120 - (31%)
• Similarity: 67/120 - (55%)
• Gaps: 2/120 - (1%)

  Fly     1 MDMNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEK-APKTRYAELDKKKYLVPADLTVGQFYF 64
            |..:..:|:..||..|..|..:||.::|.::|||:|: ..:.:...|||.|:|||..:.:.:...
  Rat     1 MPSDRPFKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVK 65

  Fly    65 LIRKRINLRPDDALFFFVN-NVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
            :||:|:.|.|..|.|..|| :.:...|..:..:|::..|:|.|||:.|..:..:|
  Rat    66 IIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg8b	NP_001303480.1	GABARAP	7..118	CDD:176355	36/112 (32%)
Map1lc3a	NP_955794.1	Ubl_ATG8_MAP1LC3A	4..120	CDD:340754	36/115 (31%)
		Important for interaction with ATG13 and for autophagosome formation. /evidence=ECO:0000250|UniProtKB:Q9H492	49..53		2/3 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1654
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54038
OrthoDB	1	1.010	-	-		D1508198at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.830