DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg8b and FMN1

DIOPT Version :9

Sequence 1:NP_001303480.1 Gene:Atg8b / 42132 FlyBaseID:FBgn0038539 Length:120 Species:Drosophila melanogaster
Sequence 2:NP_001264242.1 Gene:FMN1 / 342184 HGNCID:3768 Length:1419 Species:Homo sapiens


Alignment Length:111 Identity:24/111 - (21%)
Similarity:48/111 - (43%) Gaps:24/111 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DMNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFYFLI 66
            :..|.:.||.:..|::...:...:|  ::|..|::.        ||.|:     ..|||    ::
Human  1017 EFEYLFSKDTTQQKKKPLSETYEKK--NKVKKIIKL--------LDGKR-----SQTVG----IL 1062

  Fly    67 RKRINLRPDD---ALFFFVNNVIPPTSATMGALYQEHFDKDYFLYI 109
            ...::|...|   |:|...::|:  ...|:.|||:....:|..:.|
Human  1063 ISSLHLEMKDIQQAIFNVDDSVV--DLETLAALYENRAQEDELVKI 1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8bNP_001303480.1 GABARAP 7..118 CDD:176355 23/106 (22%)
FMN1NP_001264242.1 Microtubule-binding. /evidence=ECO:0000250 1..622
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 138..194
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..331
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..641
Mediates interaction with alpha-catenin. /evidence=ECO:0000250 456..842
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 685..711
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 859..978
FH2 973..1370 CDD:214697 24/111 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1390..1419
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1654
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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