Protein Alignment Atg8b and atg8

DIOPT Version :9

• Sequence 1: NP_001303480.1
• Gene: Atg8b / 42132
• FlyBaseID: FBgn0038539
• Length: 120
• Species: Drosophila melanogaster
• Sequence 2: NP_596531.1
• Gene: atg8 / 2541386
• PomBaseID: SPBP8B7.24c
• Length: 121
• Species: Schizosaccharomyces pombe
• Alignment Length: 116
• Identity: 65/116 - (56%)
• Similarity: 88/116 - (75%)
• Gaps: 0/116 - (0%)

  Fly     3 MNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFYFLIR 67
            |..|:|.|.||:||:.|..:||.|||||:|||.||..|:..|.:||||||||:|||||||.::||
pombe     1 MRSQFKDDFSFEKRKTESQRIREKYPDRIPVICEKVDKSDIAAIDKKKYLVPSDLTVGQFVYVIR 65

  Fly    68 KRINLRPDDALFFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
            |||.|.|:.|:|.|::.::|||:|.|..:|:||..:|.||||:|:.||.:|
pombe    66 KRIKLSPEKAIFIFIDEILPPTAALMSTIYEEHKSEDGFLYITYSGENTFG 116

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg8b	NP_001303480.1	GABARAP	7..118	CDD:176355	62/110 (56%)
atg8	NP_596531.1	GABARAP	5..116	CDD:176355	62/110 (56%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	140	1.000	Domainoid score	I1215
eggNOG	1	0.900	-	-		E1_KOG1654
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	153	1.000	Inparanoid score	I1291
OMA	1	1.010	-	-		QHG54038
OrthoFinder	1	1.000	-	-		FOG0000590
OrthoInspector	1	1.000	-	-		otm47100
orthoMCL	1	0.900	-	-		OOG6_100707
Panther	1	1.100	-	-	O	PTHR10969
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X355
TreeFam	1	0.960	-	-
	12	11.830