Protein Alignment Atg8b and lgg-2

DIOPT Version :9

• Sequence 1: NP_001303480.1
• Gene: Atg8b / 42132
• FlyBaseID: FBgn0038539
• Length: 120
• Species: Drosophila melanogaster
• Sequence 2: NP_001255523.2
• Gene: lgg-2 / 177989
• WormBaseID: WBGene00002981
• Length: 142
• Species: Caenorhabditis elegans
• Alignment Length: 114
• Identity: 39/114 - (34%)
• Similarity: 66/114 - (57%)
• Gaps: 2/114 - (1%)

  Fly     7 YKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAEL-DKKKYLVPADLTVGQFYFLIRKRI 70
            :|:...|.:|:.:.::||.:.|::||||:|:....|...| |:.|:|||..:||.:...::|:|:
 Worm    29 FKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRL 93

  Fly    71 NLRPDDALFFFVN-NVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118
            .|.|..|.|..|| ..:...|.:|..||.:..|.|.|:|:.||.:..:|
 Worm    94 QLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 142

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg8b	NP_001303480.1	GABARAP	7..118	CDD:176355	38/112 (34%)
lgg-2	NP_001255523.2	GABARAP	29..142	CDD:176355	38/112 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54038
OrthoDB	1	1.010	-	-		D1508198at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.930