DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxt and Pxdn

DIOPT Version :9

Sequence 1:NP_650648.3 Gene:Pxt / 42131 FlyBaseID:FBgn0261987 Length:809 Species:Drosophila melanogaster
Sequence 2:NP_001258190.1 Gene:Pxdn / 554172 RGDID:1560694 Length:1475 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxtNP_650648.3 GH64-TLP-SF <67..119 CDD:295337
An_peroxidase 237..772 CDD:281139
peroxinectin_like 396..767 CDD:188655
PxdnNP_001258190.1 leucine-rich repeat 42..60 CDD:275380
leucine-rich repeat 63..84 CDD:275380
LRR_4 107..148 CDD:289563
LRR_8 108..167 CDD:290566
leucine-rich repeat 109..132 CDD:275378
LRR_4 132..172 CDD:289563
leucine-rich repeat 133..156 CDD:275378
LRR_8 155..>192 CDD:290566
leucine-rich repeat 157..180 CDD:275378
leucine-rich repeat 181..193 CDD:275378
TPKR_C2 189..240 CDD:301599
Ig 243..330 CDD:299845
I-set 243..330 CDD:254352
I-set 339..426 CDD:254352
Ig 343..426 CDD:299845
I-set 430..516 CDD:254352
Ig3_Peroxidasin 443..516 CDD:143222
I-set 522..608 CDD:254352
Ig4_Peroxidasin 539..607 CDD:143223
An_peroxidase 738..1279 CDD:281139
peroxidasin_like 861..1300 CDD:188658
VWC 1411..1466 CDD:214564
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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